Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1646 ATGAAAATTATAGTGCCTTTGCAAGGGGTTGTTCAAGGAACAGGTGGACTTTTTTGGGGTTCAGTTATTCCTTGTGCTCTTTTCTATTTTCTTCAGCTTTATTTTAGGACACGTCACCGTAACAACCAATCTCCTCCTCCTTCACCGGAGGTCCCCACCGCCTTGTCACGCTCTCTCTCCCCGCGGCTCAGAGGCTCAACCGCCTCCGCTTGTATTTCGGGTCGGGTCAATTCTATAATCGCAGCAAATTCTCCTTATTACGTTGGTTTAAACAAAGTCGAAGATAATCCGTATCATCGGATTCATAATCCTGATGGTGTTATTCAGCTTGGTTTGGCACAAAACACCCTATGTGTGGATTTGATTGAAGAATGGATTCGTCACAATGGAAGCGCTGCTATACTAGGGACATCATCGAATTGCGGTTGCCTCAGTATCACTGACCTTGCTACTTACCATGGATTCATGGACTTCAAAGTGGTTGTGGCTGGTTTCATGTCTCAAGTTTTGGAAAAACCAGTTTTCTTCAACCCCTCACATATGGTGCTAACTGCAGGTGCCATCCCTGCCATCGAAATTCTAAGCTTCTGCCTAGCAGATAATGGAAATGCATTCCTTGTTCCCACGCCTCATAGTCCTGGCTTTGACGAGGTCGTGAAATGGCGATCTGAAGTGGATATAGTATATGTTCCATGTCGCAGCGCTGATGACTTCAACCTAAGCATAACTGCACTTGACCAAGCCTTCAACCAAGTGAAGAAACGTAGTCAAAAAGTTCGTGGAGTTATAATATCAAACCCTTCAAACCCTGCTGGCAAATTGTTAAATCGAGAAACACTACTTGATCTTCTGGACTTCGCTAGAGAAAAGAACATTCACATAATCTCTAATGAAATATTTGGAGGCTCTGCTTATAGAAACGAAGAGTTTGTGAGCATGGCAGAAATAATGGAAGCAGAAGATCATGATCGGGACAGAGTTCATATAGTGTTTGATTTAGCTAATGAGCTATATGTTCCAAGTTTTAATGTAGGAGTTATCTACTCCTATAATGAGAATGTTGTGGCTGCTTCCAAAAAAATGGCAAAATTCTCAACTGTTTCTGCTCCAACTCAGCAATTGCTTATCACCATGATTTCAGATACAAGGTTTATTCAAGAACTCATAAAGACTAACAAATTGAGACTGCAAAAAATGTATAATACATTTGTGGCAGGATTAGAGCAGTTGGGAATTGAGTGCACCAGAAGCAGTGGTGGCTTTTGCTGCTGGGCTGACATGAGTAGATCCATCCGTTCTTACAGTGTAAAGGGGGAACTGGAGCTCTGGGATAGATTGCTGAATGTAGCTAAGATCAATGTTACTCCGGGATCCTCTTGTCACTGTATTGAACCTGGATGGTTCTGTTTTTGTTTTACTACATTGACTGAAAATGATATTCCTGTAGTAATGGAACGGATCAGGAGAATTTTCGAGCCCACCAGTTGA 1488 0.4227 MKIIVPLQGVVQGTGGLFWGSVIPCALFYFLQLYFRTRHRNNQSPPPSPEVPTALSRSLSPRLRGSTASACISGRVNSIIAANSPYYVGLNKVEDNPYHRIHNPDGVIQLGLAQNTLCVDLIEEWIRHNGSAAILGTSSNCGCLSITDLATYHGFMDFKVVVAGFMSQVLEKPVFFNPSHMVLTAGAIPAIEILSFCLADNGNAFLVPTPHSPGFDEVVKWRSEVDIVYVPCRSADDFNLSITALDQAFNQVKKRSQKVRGVIISNPSNPAGKLLNRETLLDLLDFAREKNIHIISNEIFGGSAYRNEEFVSMAEIMEAEDHDRDRVHIVFDLANELYVPSFNVGVIYSYNENVVAASKKMAKFSTVSAPTQQLLITMISDTRFIQELIKTNKLRLQKMYNTFVAGLEQLGIECTRSSGGFCCWADMSRSIRSYSVKGELELWDRLLNVAKINVTPGSSCHCIEPGWFCFCFTTLTENDIPVVMERIRRIFEPTS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1646 495 Gene3D - 130 381 IPR015421 GO:0003824
Mal6g1646 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 110 136 - -
Mal6g1646 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 326 350 - -
Mal6g1646 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 358 381 - -
Mal6g1646 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 202 223 - -
Mal6g1646 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 256 280 - -
Mal6g1646 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 180 200 - -
Mal6g1646 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 292 315 - -
Mal6g1646 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 143 159 - -
Mal6g1646 495 MobiDBLite consensus disorder prediction 41 60 - -
Mal6g1646 495 CDD AAT_like 154 489 - -
Mal6g1646 495 Pfam Aminotransferase class I and II 109 487 IPR004839 GO:0009058|GO:0030170
Mal6g1646 495 Gene3D Aspartate Aminotransferase, domain 1 96 486 IPR015422 GO:0003824
Mal6g1646 495 PANTHER AMINOTRANSFERASE ACS12-RELATED 2 492 - -
Mal6g1646 495 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 492 - -
Mal6g1646 495 SUPERFAMILY PLP-dependent transferases 87 492 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1646 Mal-Chr6 30463147 30465848 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1646 K14270 - gmx:100783490 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1646 6 30463147 30465848 Mal6g1646 6 30463147 30465848 ECH