Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1635 ATGGCTGCATTCGAGGCGAGAAAACTCAAGTTGATTACTACTGGCACTGAAGCCCTTATCATGGGGATTCTTATTGAGGGTACTAATCTGGCTAGCAAGTTTTTGCGAGCCAATGGAATTACACTTTTCAAGGTGCGAGATGAAATTGTGAAAGTACTTGGAGAAGTTGATCCGTTAGCAGTAATCCCCGAGCGTCCTCCAATGACTGATGATGCTCAGAGGGCCCTTGATTGGGCTGTTGATCGGAAATTAAAATCTGGTGATGGTGGGGAAGTAACCACAGCACACATAATTCTTGGCATTTGGTCTGAAGTAGATTCCCCAGGTCACAAGATACTATCCAACCTTGGCATTAATGACGAAAAAGCTAAAGAGCTAGAGTCCTCAATTTCTAAACATGTTAACGCTGAATGA 414 0.4348 MAAFEARKLKLITTGTEALIMGILIEGTNLASKFLRANGITLFKVRDEIVKVLGEVDPLAVIPERPPMTDDAQRALDWAVDRKLKSGDGGEVTTAHIILGIWSEVDSPGHKILSNLGINDEKAKELESSISKHVNAE* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1635 137 ProSiteProfiles Clp repeat (R) domain profile. 1 133 IPR004176 -
Mal6g1635 137 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 1 134 IPR044217 -
Mal6g1635 137 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT2, CHLOROPLASTIC 1 134 - -
Mal6g1635 137 SUPERFAMILY Double Clp-N motif 5 123 IPR036628 -
Mal6g1635 137 Pfam Clp amino terminal domain, pathogenicity island component 91 130 IPR004176 -
Mal6g1635 137 Pfam Clp amino terminal domain, pathogenicity island component 5 54 IPR004176 -
Mal6g1635 137 Gene3D - 1 137 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1635 Mal-Chr6 30263906 30266419 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1635 - - cam:101488253 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1635 6 30263906 30266419 Mal6g1635 6 30263906 30266419 ECH