Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1623 ATGGCTTCCACACCGTCGCCGCCAATGTCGCCGCCGGTGAACCCCGGTCGCATTCGGACCCTAAAAGAAGGTTCTGGAAAAACCGGCCCCGTCGTGTACTGGATGTTCAGAGATCAACGGTTGAAAGACAATTGGGCTCTCATCCACGCCGTTCATCAAGCCAACAACGCAAAAGTTCCTGTAGCCGTTGTTTTCAATCTGTTTGATCATTTTCTCGGTGCAAAGGCGCGTCATTTAGGGTTCATGCTTAAGGGTTTGCGTCAATTGTGTCACCAACTTCAACACACTCTTCAAATTCCCTTTTTCTTAGTTCGGGGTGAGGCAGGGGAAACTGTACCAAAATTTGTTAGGGAATGTGGAGCTTCACTTTTGGTGACAGATATGTCACCTTTAAGAGAAGTGAAGAAATGCAAAGCTGAGATTTGTGAGAGGGTTGGTGATTTGGCTACTGTTCATGAAGTTGATGCTCACAATGTTGTTCCTCTTTGGGTTGCTTCTGAGAAATTGGAGTATAGTGCTAGAACAATAAGGGGAAAGATAAACAAAAAACTTTCTGATTATCTCGTTGATTTTCCCAATATTGAACCACCAACTACAAAATGGGTCATCACTAAGGATTATGTCATAGATTGGGATGATATCATTGCTCAAGTGTTAAGGAGTGGATCTGAGGTTCCTGAAGTGGATTGGTGTGAGCCTGGAGAAATTGCTGCAATGGAAGTATTGATGGGAAGTAAAAATGGATTCTTGACTAAAAGGTTGAGAAATTATTCCACAGATCGCAATAACCCTTGTAAACCAACTGCACTTTCTGGTTTATCTCCCTATTTGCATTTTGGACAGATATCTGCTCAAAGATGTGCTTTAGAAGCTCGTAAGCTACGAGCTTCATATCCTCAGGCGATTGATACTTTCTTGGAGGAGCTGATTGTGCGGAGAGAACTTGCTGATAACTTTTGTTTTTATCAACCTCATTATGATTCATTACAAGGAGCATGGGATTGGGCTCGTAAGACCTTACTCGATCACGCCTCTGATCAGCGACCCCATACTTACACGAGGGAGCAATTAGAGAAGGCACAAACTGCTGATCCTCTCTGGAATGCTTCTCAACTGGAGATGGTTCACTACGGGAAAATGCATGGTTTTATGCGAATGTATTGGGCGAAGAAGATTCTTGAATGGACAAGAGGACCTGAAGAAGCCCTTGAGATATGTATATATCTAAATGATAAGTATGAAATGGATGGGAGGGATCCAAGTGGTTATAATGGCTGCATGTGGTCAATATGTGGGGTACATGATCAGGGTTGGCGAGAGCGTCCCATTTTTGGGAAAATTCGATACATGAATTATGAAGGGTGCAAAAGAAAATTTGATGTTGACAGATACATTGCATATGTTAATAAAATAGTTGGTGAGCTCAGGAAGAGAAAGGCGGAAAATTTACTGTCTCAAAAGGAGAAAGTACTCCGCCGTAGTACTCCCTGA 1491 0.4279 MASTPSPPMSPPVNPGRIRTLKEGSGKTGPVVYWMFRDQRLKDNWALIHAVHQANNAKVPVAVVFNLFDHFLGAKARHLGFMLKGLRQLCHQLQHTLQIPFFLVRGEAGETVPKFVRECGASLLVTDMSPLREVKKCKAEICERVGDLATVHEVDAHNVVPLWVASEKLEYSARTIRGKINKKLSDYLVDFPNIEPPTTKWVITKDYVIDWDDIIAQVLRSGSEVPEVDWCEPGEIAAMEVLMGSKNGFLTKRLRNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRASYPQAIDTFLEELIVRRELADNFCFYQPHYDSLQGAWDWARKTLLDHASDQRPHTYTREQLEKAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEMDGRDPSGYNGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDVDRYIAYVNKIVGELRKRKAENLLSQKEKVLRRSTP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1623 496 MobiDBLite consensus disorder prediction 1 24 - -
Mal6g1623 496 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 30 201 IPR036155 -
Mal6g1623 496 TIGRFAM phr2: deoxyribodipyrimidine photolyase 13 467 IPR008148 GO:0003904|GO:0006281
Mal6g1623 496 ProSitePatterns DNA photolyases class 2 signature 2. 432 451 IPR032673 -
Mal6g1623 496 Pfam DNA photolyase 31 193 IPR006050 -
Mal6g1623 496 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 29 162 IPR006050 -
Mal6g1623 496 Gene3D HUPs 11 156 IPR014729 -
Mal6g1623 496 PANTHER DEOXYRIBODIPYRIMIDINE PHOTOLYASE 13 491 - -
Mal6g1623 496 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 329 479 - -
Mal6g1623 496 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 221 477 IPR036134 -
Mal6g1623 496 ProSitePatterns DNA photolyases class 2 signature 1. 305 319 IPR032673 -
Mal6g1623 496 Gene3D - 157 328 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1623 K01669 - gmx:100170749 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1623 6 30151706 30154706 Mal6g1623 6 30151706 30154706 ECH