Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1613 ATGGGTAGCATAGGTGTATTACCCTCAACACCTGGTAAATTAAAACCAGAAAAATACAACCACTACCAACCTTATAATAACAACATTCATCGCATTAGATCATCAAAATTCACACTATGGTCTTCAATTTTCCTTTTCCTCGCTTTCATTATTTTCTTCTTCATTCTCTCACCATCTTCACCTTCCACCTCATCACTCTCCACTCACAATTCATGGGGCGGACCCGAATGGGAAAAACGGGTCACCAAATCCACCCGCCATAACTCCGGTTCCGGTTCCGGTTCACCTCTCACTGTTCTTGTCACCGGCGCTTCCGGTTTTGTCGGTATGCATGTCTCACTCGCACTTAAGCGCCGCGGTGATGGAGTTTTAGGGCTCGATAATTTCAACCGGTATTATGATCCTAACCTTAAACGCGCTCGTGAGAAGTTACTTTCACGCGCTGGTGTTTTCGTTGTTGAAGGTGATATTAATGATGTTAATCTTCTTCGTAAACTGTTTGATGTTGTTGCTTTCACACATGTTATGCATCTTGCTGCTCAAGCTGGGGTTCGTTATGCTATGCGAAACCCTAATTCGTATGTTCACAGCAATATTGCAGGTTTTGTTAACCTCCTTGAAGTTTCTAAATCGGCGAACCCTCAACCAGCGATTGTTTACGCTTCTTCGAGTTCGGTTTACGGGTTGAATTCGAAAGTTCCTTTTTCGGAAAAGGATCGAACGGATCAACCAGCTAGTCTCTATGCAGCTACAAAGAAAGCTGGTGAAGAATTTGCTCACACATATAATCATATCTATGGTCTTTCTATAACGGGTTTGCGCTTCTTCACTGTTTATGGTCCTTGGGGTCGTCCTGATATGGCTTATTTCTTCTTCACCAAGGATATTTTGAAAGGGAAGCAAATTACTGTGTTTGAATCCCCTGATGGTGGAAGTGTTGCTAGAGATTTTACGTATATTGATGATATTGTGAAAGGGTGTTTAGGGGCTTTAGATACAGCTAAGAAGAGTACCGGTGTTGGTGGGAAGAAGAAAGGGAATGCACAATATAGGATTTTTAACTTGGGTAATACTTCGCCGGTTCCGGTTAGTGAGCTTGTCAATATATTGGAGAAGCTTTTGAAGGTGAAGGTAAAGAGGAAGGTAATGCCAATGCCAAGAAATGGTGATGTTAGGTTTACTCATGCTAATATCAGCAGGGCACGGAGGGAGCTTGGTTACATGCCTACTACTGATTTGGAGGCTGGACTCAAGAAGTTTGTGAGGTGGTACCTTGACTTTTACTCTCCTTTTAAGAACAAGAATGTTTGGTGA 1314 0.4254 MGSIGVLPSTPGKLKPEKYNHYQPYNNNIHRIRSSKFTLWSSIFLFLAFIIFFFILSPSSPSTSSLSTHNSWGGPEWEKRVTKSTRHNSGSGSGSPLTVLVTGASGFVGMHVSLALKRRGDGVLGLDNFNRYYDPNLKRAREKLLSRAGVFVVEGDINDVNLLRKLFDVVAFTHVMHLAAQAGVRYAMRNPNSYVHSNIAGFVNLLEVSKSANPQPAIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEFAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKQITVFESPDGGSVARDFTYIDDIVKGCLGALDTAKKSTGVGGKKKGNAQYRIFNLGNTSPVPVSELVNILEKLLKVKVKRKVMPMPRNGDVRFTHANISRARRELGYMPTTDLEAGLKKFVRWYLDFYSPFKNKNVW* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1613 437 PANTHER EPIMERASE-RELATED 3 435 - -
Mal6g1613 437 PRINTS Nucleotide sugar epimerase signature 350 365 - -
Mal6g1613 437 PRINTS Nucleotide sugar epimerase signature 390 407 - -
Mal6g1613 437 PRINTS Nucleotide sugar epimerase signature 315 330 - -
Mal6g1613 437 PRINTS Nucleotide sugar epimerase signature 125 141 - -
Mal6g1613 437 Pfam NAD dependent epimerase/dehydratase family 99 336 IPR001509 -
Mal6g1613 437 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 3 435 - -
Mal6g1613 437 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 96 430 IPR036291 -
Mal6g1613 437 Gene3D - 98 429 - -
Mal6g1613 437 MobiDBLite consensus disorder prediction 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1613 Mal-Chr6 29988015 29990014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1613 1 429 Miscellaneous Gene Families AT4G00110 72.685 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1613 K08679 - gmx:100788035 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1613 6 29988015 29990014 Mal6g1613 6 29988015 29990014 ECH