Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1583 ATGAGTACTCCAACGGCGAAAGGCGAAGACAGAGATATTATTATAACAAAAAGTGGTAGAAAAGATGCATCATCTTCTAGTGTTCAGGGATTGAAGTTTAAGTCTGGTAGTAGTAGCAAGACCAAATCAATTCATCCTCCGATTGAAACGCATTGGGATCTACCTACACAAAAAGGAAAGAAAAAAGCTTCATTCTCCATCAAGTCAATGATGTCTTACCCCTTCATGAAACTTGGAAGGAGTAAAAGTTTGAAAATGGTTCTAGAAGGAACTCATGATCCAATTGATGAAAAAATTGTTGAGGCTTTCCGCGAAATGCTTTCGCGTGAGGGTCTATTACCACCTAAGCACAATGATTATCATACTCTTCTAAGGTTTCTGCGGATGAATGATTTTGATATGACAATATCCAAAGATATGTTTCTCAATTATCTCAAATGGCGAAAGGAGTTTCGAGTAGACATGATTCATAAGGAATTCAAATTCACAGAATACACAGAAGTGAAGAAATGCTATCCTCACGGATTCCATGGAGTTGATAAATGTGGCAGACCTGTGTATATTGAGAGAATTGGTATGGTAGATGTTAACAAATTGTGGCAAGTAACCACACATGAAAGATTTATTCGGTATCATGTGTCGGAACAAGAGAAAACACTACGAGTAAGATACCCTACATGTTCACTAGCAGCTAAAAGACACATAGCATCCACCACAAGTATCTTGGATGTCAATGGAGTAGGAATGTCTAATTTCTCGAAACCTGCAAGGTACATTTTTATGGAAATTCAGAAGATCGATAGCAGTTACTATCCTGAGACTCTAAATAAACTCTTCATTGTTAATGCTGGTTCTGGGTTTAAGATGTTGTGGAAAGCAGTGAAGGCATTCCTAAGTGAACGCACAGTAGCGAAAGTTCAAGTATTGGGTTCTAATTATCTCAGTGTGTTGCTCGAGGCTATTGATCCAAGTAACTTGCCAACTTTTTTGGGTGGTAATTGCACATGTTCTGATTATGGAGGTTGCTTGATGAGTGACCAAGGTCCATGGAAAAATTCAGAATTGTTAGAAATGATTCAGACAGTTTCTTTTACCGAAGAGATTGATGGTGCGTGCGAACAAAACAATGTGGTTTCTAAAGGATCCATGATGTCCAAAAAGGTTGACATGCAAAACAAAGATGATGCAAGTATGAGTTCGACACTCGAGGAGACAACAAGGGCTAGAACAGACTTGTCATGTAGGTTAGCATTACAAAATATTGATTGGCTTGAAGCTAGTCTTGGAGATATGAAGAATAAAATAAAGACATTAGAAGATGCACTTCAAGACACAAAGATGGCATTGAAAGAACTTCACAACATATAG 1368 0.3794 MSTPTAKGEDRDIIITKSGRKDASSSSVQGLKFKSGSSSKTKSIHPPIETHWDLPTQKGKKKASFSIKSMMSYPFMKLGRSKSLKMVLEGTHDPIDEKIVEAFREMLSREGLLPPKHNDYHTLLRFLRMNDFDMTISKDMFLNYLKWRKEFRVDMIHKEFKFTEYTEVKKCYPHGFHGVDKCGRPVYIERIGMVDVNKLWQVTTHERFIRYHVSEQEKTLRVRYPTCSLAAKRHIASTTSILDVNGVGMSNFSKPARYIFMEIQKIDSSYYPETLNKLFIVNAGSGFKMLWKAVKAFLSERTVAKVQVLGSNYLSVLLEAIDPSNLPTFLGGNCTCSDYGGCLMSDQGPWKNSELLEMIQTVSFTEEIDGACEQNNVVSKGSMMSKKVDMQNKDDASMSSTLEETTRARTDLSCRLALQNIDWLEASLGDMKNKIKTLEDALQDTKMALKELHNI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1583 455 Pfam CRAL/TRIO domain 172 332 IPR001251 -
Mal6g1583 455 SUPERFAMILY CRAL/TRIO domain 164 358 IPR036865 -
Mal6g1583 455 Coils Coil 421 455 - -
Mal6g1583 455 MobiDBLite consensus disorder prediction 19 45 - -
Mal6g1583 455 Gene3D - 73 151 - -
Mal6g1583 455 MobiDBLite consensus disorder prediction 1 55 - -
Mal6g1583 455 Gene3D - 152 363 IPR036865 -
Mal6g1583 455 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 164 338 IPR001251 -
Mal6g1583 455 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 37 453 - -
Mal6g1583 455 CDD SEC14 165 333 IPR001251 -
Mal6g1583 455 PRINTS Cellular retinaldehyde-binding protein signature 122 144 - -
Mal6g1583 455 PRINTS Cellular retinaldehyde-binding protein signature 324 333 - -
Mal6g1583 455 PRINTS Cellular retinaldehyde-binding protein signature 291 310 - -
Mal6g1583 455 SUPERFAMILY CRAL/TRIO N-terminal domain 90 159 IPR036273 -
Mal6g1583 455 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH11 37 453 - -
Mal6g1583 455 SMART sec14_4 164 335 IPR001251 -
Mal6g1583 455 SMART CRAL_TRIO_N_2 119 144 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1583 Mal-Chr6 29122793 29125750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1583 95 329 Acyl Lipid Metabolism Gene Families AT5G47730 29.508 3.85e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1583 - - gmx:100807344 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1583 6 29122793 29125750 Mal6g1583 6 29122793 29125750 ECH