Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1543 ATGATGATGTTGCTACTTCGTCTTCCTCCACTGTCCTTTCTCTTCTTCTTCTTCCCCATTTCACACTCAATTCCCTTCATTGTCCTTCACGGAATTGGAGATCAGTGCTCTAACCGTGGAGTCAAATCATTCACCGAGGAGTTGATCAGTTACTCTGGTGTTCAGGGATTTTGCGTTGAGGTAGGCAATGGATCATGGGATTCATGGTTTATGCCTTTGAAAGAGCAGACAGATGTTGTTTGTCAGAAGGTGAAGGAAATGAAAGAATTGAAGGGAGGATACAACATTGTTGGCCTCTCCCAGGGAAATTTAATTGGTCGAGGTGTGGTCGAGTTTTGTGAAGGAGGACCTCCCGTTAAGAACTTTATCTCTTTAGCCGGCCCTCATGCTGGTACTGCTTCAGTTCCCCTGTGTGGTACAGGTATCTTTTGCGTACTTGCAGACAATCTCATCAAGGGAGAGGTTTACAGTAGCTATATTCAAGAACACTTGGCTCCTAGCGGATATCTTAAATTACCAAATGCCATACCTAAATATTTGGAGAACTGTAGGTTCCTCCCAAAGCTTAATAATGAAAAACCTGGTCAGAGGAATTCCACTTACAAGGAAAGATTTAGTAGCTTAGAGAATTTGGTACTGATCATGTTTGAGCATGACACAGTTTTAATACCGAAAGAAACATCCTGGTTTGGATATTATCCAGATGGCAGCTTCAAGCCAGTTTTACCAGCTCAAGAGACAAAACTCTACACTGAAGACTGGATTGGCTTAAGAACTTTAGACGAAGCTGGCCGTGTCCATTTCATTAGCGTTCCGGGAAAACATCTGGGGATATCCGAGGCAGATATGAAGAAACATGTAGTGCCATATTTGAATGGCGAAACATCAAGAAAAGATAGCACCACTATGGCTGGCTTTTGGAGGATGCGTGGAGTTAATCAGAGATTTATTCAAATCAACAAGAATGAGTAA 972 0.4239 MMMLLLRLPPLSFLFFFFPISHSIPFIVLHGIGDQCSNRGVKSFTEELISYSGVQGFCVEVGNGSWDSWFMPLKEQTDVVCQKVKEMKELKGGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFISLAGPHAGTASVPLCGTGIFCVLADNLIKGEVYSSYIQEHLAPSGYLKLPNAIPKYLENCRFLPKLNNEKPGQRNSTYKERFSSLENLVLIMFEHDTVLIPKETSWFGYYPDGSFKPVLPAQETKLYTEDWIGLRTLDEAGRVHFISVPGKHLGISEADMKKHVVPYLNGETSRKDSTTMAGFWRMRGVNQRFIQINKNE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1543 323 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 13 306 - -
Mal6g1543 323 Gene3D alpha/beta hydrolase 19 303 IPR029058 -
Mal6g1543 323 SUPERFAMILY alpha/beta-Hydrolases 21 291 IPR029058 -
Mal6g1543 323 Pfam Palmitoyl protein thioesterase 25 275 - -
Mal6g1543 323 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 13 306 - -
Mal6g1543 323 PRINTS Palmitoyl protein thioesterase signature 223 241 IPR002472 GO:0098599
Mal6g1543 323 PRINTS Palmitoyl protein thioesterase signature 268 286 IPR002472 GO:0098599
Mal6g1543 323 PRINTS Palmitoyl protein thioesterase signature 17 39 IPR002472 GO:0098599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1543 Mal-Chr6 28596207 28614768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1543 17 304 Acyl Lipid Metabolism Gene Families AT3G60340 70.486 3.94e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1543 K01074 - gmx:100809770 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1543 6 28596207 28614768 Mal6g1543 6 28596207 28614768 ECH