Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1518 ATGGCTTCACAAGTTTTTCTTCAGGCTCTGTTTACCCCAATTCAATCTCCTCCAACGAAGCTATGTTTCACTTCTTCTTGCACCGCTTCCACATTCAGTTCTCGTAACTTTCCGTTGATTTCAACCTCAATTTCACGCCGTTGCAGTCCTCTTATTGCTAAACCTAGTTTTGTTGTGGGAGCTGATTCCAATTCCGACGCTGTTTCCGCTTCGGATGCTGTTGATGAAGTTCCGGAAACTGAAGGAGAACAGGTTTTGGATTCTGAACCTGAGGTGGAGGAAGCGAAGCCGCCTAGACAAACTCGGGTTAAGCTTGGCGATGTTATGGGGATATTGCATAAGAGGGCAATTGCGGCTTCAGATGAAGTGAGGGCCACTCCAGACCTAAGGACTGGAGATATTGTGGAAATCAGATTGGAAGTTCCGGAGAACAAGCGTAGGTTATCCATTTATAAAGGTATTGTCATCTCAAGACAAAATGCTGGTATTCACACAACTATTCGCATCCGAAGAATTATTGCCGGCACAGGGGTTGAGATAGTCTTCCCAATTTACTCACCAAACATCAAAGAAATTAAAGTGGTAAAGCACCGGAAGGTCAGGCAGGCAAGATTGTACTATCTAAAAGACAAGCTTCCAAGATTCTCCACTTTCAAATGA 660 0.4424 MASQVFLQALFTPIQSPPTKLCFTSSCTASTFSSRNFPLISTSISRRCSPLIAKPSFVVGADSNSDAVSASDAVDEVPETEGEQVLDSEPEVEEAKPPRQTRVKLGDVMGILHKRAIAASDEVRATPDLRTGDIVEIRLEVPENKRRLSIYKGIVISRQNAGIHTTIRIRRIIAGTGVEIVFPIYSPNIKEIKVVKHRKVRQARLYYLKDKLPRFSTFK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1518 219 Pfam Ribosomal protein L19 123 212 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mal6g1518 219 PANTHER RIBOSOMAL PROTEIN L19 8 219 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mal6g1518 219 SUPERFAMILY Translation proteins SH3-like domain 121 219 IPR008991 -
Mal6g1518 219 PRINTS Ribosomal protein L19 signature 172 195 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mal6g1518 219 PRINTS Ribosomal protein L19 signature 113 142 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mal6g1518 219 MobiDBLite consensus disorder prediction 69 97 - -
Mal6g1518 219 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 8 219 - -
Mal6g1518 219 Gene3D - 101 218 IPR038657 -
Mal6g1518 219 TIGRFAM rplS_bact: ribosomal protein bL19 124 211 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1518 Mal-Chr6 28277692 28280296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1518 K02884 - gmx:100305649 249.21