Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1469 ATGGCACTGAGGATGTGGGCTTCTTCAACTGCCAATGCTCTCAAACTCTCTTCTTCTTCCTCCAGATTACATCTCTCCCCTCCTTTTTCCATCTCTAGATGTTTCTCAACTGTGTTGGATGGACTCAAGTATGCATCTTCACATGAATGGGTGAAGCATGAAGGCTCAGTAGCCACAATTGGTATCACTGACCATGCTCAGGACCATCTTGGAGAGGTTGTGTTTGTGGAGCTTCCGGAACCCGGCGGTTCAGTTACAAAGGGTAACGGTTTCGGAGCTGTTGAAAGTGTTAAGGCAACAAGTGATGTAAACTCTCCAATTTCTGGTGAGATTGTTGAGGTTAATGATAAGCTCACCGGAAAACCTGGCTTGATCAACTCAAGCCCATATGAAGATGGATGGATGATCAAAATAAAGCCAAGTGATCCATCTGAATTAGAGTCCTTGTTGGGTGCAAAGGAATACACAAAATTTTGTGAGGAAGAAGATGCTGCACATTAA 501 0.4411 MALRMWASSTANALKLSSSSSRLHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGGSVTKGNGFGAVESVKATSDVNSPISGEIVEVNDKLTGKPGLINSSPYEDGWMIKIKPSDPSELESLLGAKEYTKFCEEEDAAH* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1469 166 Hamap Glycine cleavage system H protein [gcvH]. 39 160 IPR002930 GO:0005960|GO:0019464
Mal6g1469 166 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 166 - -
Mal6g1469 166 CDD GCS_H 44 138 IPR033753 -
Mal6g1469 166 Pfam Glycine cleavage H-protein 42 161 IPR033753 -
Mal6g1469 166 ProSiteProfiles Biotinyl/lipoyl domain profile. 57 139 IPR000089 -
Mal6g1469 166 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 82 111 IPR003016 -
Mal6g1469 166 SUPERFAMILY Single hybrid motif 38 161 IPR011053 -
Mal6g1469 166 Gene3D - 30 162 - -
Mal6g1469 166 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 166 IPR002930 GO:0005960|GO:0019464
Mal6g1469 166 TIGRFAM gcvH: glycine cleavage system H protein 40 163 IPR017453 GO:0005960|GO:0019464
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1469 Mal-Chr6 27040895 27042314 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1469 K02437 - vvi:100259229 278.485