Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1152 ATGAAGTGCCCATACTGTTCGGCGGCGCAGGGTCGTTGCACGACAACGCCCAACGGAAAATCAATCACAGAATGCACATCCTGCGGCCGCGTCGTAGAAGAACGACAATCCCATCCCCACCACATCTTCCACCTGCGCGCCCAAGATAATCCCCTATGCCTCGTCACACCAGATCTCCCTCCCCCCACACTCCACCAAAACACCATCACAAACAACGAACAACCCAACGAAGAAGAAGACCCATTCGAGCCCACGGGCTTCATAACTGCTTTCTCCACATGGTCATTAGAGCCCAGCCCACTCTACCTTCAATCTTCCCTCTCTTTTTCAGGCTACCTTGCTGAACTTGAACGCACTCTTGAATCATCATCTTCTTCTACGAATTCTTCTTCTTCGAGTGTTGTTGTTGTTGATAATCTTAGAGCTTATATGCAGATTATTGATGTTTCGTCGATACTTGGATTGGATTGTGATATTTCTGATCATGCTTTTCAGTTGTTTAGGGATTGTTGTTCTGCTACTTGTTTGAGGAATCGTAGTGTTGAAGCTCTTGCTACTGCTGCTCTTGTTCAGGCTATTCGAGAAGCTCAAGAACCTAGAACCCTTCAGGAAATTTCAATTGCAGCCAATGTGGCACAAAAGGAAATCGGGAAATACATCAAGATTTTGGGAGAAGCTTTACAGCTAAGTCAACCTATTAACAGCAATTCCATATCAGTTCATATGCCAAGATTTTGCACTCTTCTTCAGCTCAATAAATCTGCTCAGGAGCTGGCTACTCACATAGGAGACGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCAATTAGCATCTCAGCTGCCGCTATATATTTGGCTTGCCAACTAGAAGACAAACGCAAAACCCAGGCAGAAATTTGCAAAGTAACTGGTCTTACTGAAGTCACTCTGCGTAAAGTGTACAAAGAATTACTGGAGAATTGGGATGATTTACTTCCCTCTAATTACACCCCAGCTGTTCCTCCGGAGCGAGCATTTCCTACGACCTTAATTGCTTCTGGACGTTCTTCAACAACCAAGGTTGATGCTATAGAGGTTATTTCTTCTTTGGATTCAGAAAATTTGCCGGAATTTAAACAAAACAAATCTAATGAGGCCGAAGGTAAAAGTAATGCTCGTGCAAGCCAATCCACAGCTATTCAACAGTCAACGTTTTGGCAATCTCAACTTCCCAGTGCACAGAATCAACAAAATCCGAATGTTTTAGAATCAATGGATATTGATGGGTTGCAACGAAACCACCAACAACCTGATTCCATGATGGTAGAGGTCACAAATGGTGCTGCTATTGCTAGTTCTCTAAAATCAAACCAACTTTACAGTCCTCCTGCTTCAAGTTCAAGCTCTGTTATGAGGTCGTTTTCAGCTCCTCCTTCATCTGCTCCTCCAAATAATCGACCATTACAATCATCTAAGACAATGCCGGGTTTTCCAGAGTACTGA 1488 0.4382 MKCPYCSAAQGRCTTTPNGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLPPPTLHQNTITNNEQPNEEEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGYLAELERTLESSSSSTNSSSSSVVVVDNLRAYMQIIDVSSILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVAQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGDVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSSTTKVDAIEVISSLDSENLPEFKQNKSNEAEGKSNARASQSTAIQQSTFWQSQLPSAQNQQNPNVLESMDIDGLQRNHQQPDSMMVEVTNGAAIASSLKSNQLYSPPASSSSSVMRSFSAPPSSAPPNNRPLQSSKTMPGFPEY* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1152 495 CDD CYCLIN 142 223 IPR013763 -
Mal6g1152 495 CDD CYCLIN 242 320 IPR013763 -
Mal6g1152 495 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 490 IPR000812 GO:0006352|GO:0070897
Mal6g1152 495 MobiDBLite consensus disorder prediction 382 398 - -
Mal6g1152 495 SMART cyclin_7 240 321 IPR013763 -
Mal6g1152 495 SMART cyclin_7 144 225 IPR013763 -
Mal6g1152 495 MobiDBLite consensus disorder prediction 370 398 - -
Mal6g1152 495 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Mal6g1152 495 PRINTS Transcription initiation factor IIB signature 212 227 IPR000812 GO:0006352|GO:0070897
Mal6g1152 495 PRINTS Transcription initiation factor IIB signature 241 259 IPR000812 GO:0006352|GO:0070897
Mal6g1152 495 PRINTS Transcription initiation factor IIB signature 307 321 IPR000812 GO:0006352|GO:0070897
Mal6g1152 495 PRINTS Transcription initiation factor IIB signature 275 291 IPR000812 GO:0006352|GO:0070897
Mal6g1152 495 PRINTS Transcription initiation factor IIB signature 186 205 IPR000812 GO:0006352|GO:0070897
Mal6g1152 495 MobiDBLite consensus disorder prediction 452 487 - -
Mal6g1152 495 SUPERFAMILY Cyclin-like 141 231 IPR036915 -
Mal6g1152 495 Gene3D - 140 231 - -
Mal6g1152 495 Gene3D - 240 336 - -
Mal6g1152 495 MobiDBLite consensus disorder prediction 452 495 - -
Mal6g1152 495 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 490 - -
Mal6g1152 495 SUPERFAMILY Cyclin-like 238 336 IPR036915 -
Mal6g1152 495 Pfam Transcription factor TFIIB repeat 142 223 IPR013150 GO:0017025
Mal6g1152 495 Pfam Transcription factor TFIIB repeat 240 321 IPR013150 GO:0017025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1152 K03124 - gmx:102662353 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1152 6 17654538 17658759 Mal6g1152 6 17654538 17658759 ECH