Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1140 ATGGTGCACAGTGCGTACGATAGCATAGAACTCGTCCCCAATTTCAACGGCAAGATCGAATCCATAGAATCCTACGGCTCAAAGCTTCTACTCGGTTGCTCCGATGGATCTCTCCGAATCTACTCGCCGGAAACCGAATTCTCCGATCATTCCAAACCCTACGTACTCGAGAAGAATTTCGCTAATTTCGCGAAGAAGCCGGTTGTTTCAATGGAAGTTGTGGAATCAAGAGAGCTTCTTTTATCGCTCTCTGAATCAATCGCGTTTCATAGACTCCCTAGTTTGGAAACTATAGCGGTTATTACCAAAGCGAAAGGTGCTAATGTGTTTTGCTGGGATGATCGGAGAGGTTTTCTTGCTTTCGCGAGGCAAAAACGCGTTTGCATTTTCAGACATGATGGTGGTAGGGGATTTGTGGAGGTGAAAGAGTTTGGTGTACCAGACATGGTGAAGTCAATGAGTTGGTGTGGTGAGAATATATGTATAGGGATTAGAAGGGAATATGTGATTTTGAATGCTTCAAACGGAGCTTTGTCTGAGGTTTTTACTTCTGGGAGACTAGCGCCGCCTTTAGTAGTGCCTCTTCCGTCCGGAGAGCTGCTTCTTGGAAAGGAGAACATTGGGGTCTTTGTGGATCAAAATGGGAAACTTATTCCTGAAGGTAGGATTGTTTGGTCAGAGGCACCCTTGGAAGTTGTGATTCAGAAGCCATATGCTATCGCTTTGCTGCCCAGATTCGTGGAGATTCGATCTCTTCGACAACCTTATCCGTTGATACAAACTATTGTTCTTCGTAACGTTCGTCATCTTTGCCAGAGCAGTAATTCCGTGATACTTGCTTTGGATAATTCTATTCATGGTCTCTTCCCTGTTCCTCTTGGAGCCCAGATTGTCCAACTAACTGCTTCTGGAAACTTTGAAGAGGCCTTGTCATTGTGCAAGCTGCTTCCACCTGAAGATTCAAGTCTACGTGCTGCAAAGGAGGGATCAATTCATATAAGATATGCCCACTATCTTTTTGACAATGGGAGCTATGAGGAGGCTGTGGAACATTTTCTGGAATCTCAAGTAGATATAACCTATGTGCTTTCTCTTTATCCATCCATTATCCTTCCAAAGACAACTGTTGTTCATGAGCCAGAGAAGTTGGACATTGATGGGGATGCTTCCTATCTCTGCAGAGATTTGTCAGGTGTCTCAGATGATATGGAACCCTTACCATCAGATGAGAATGCAGCACTTGAATCCAAAAAAACGAACCATAATATGCTTATGGCTCTCATAAAATATTTGCAGAAGAAAAGAGGTAATTTTATTGAGAAGGCTACTGCAGAGGGAACTGAAGAAGTTGTTTTAGATGCAGTTGGGGATAACTATGCATCCTACAATAGGTTTAAGAAAGCAAACAAGGGGCGTGGTAATATATCGATTGGTTCTGGAGCCCGGGAGATGGCTTCAATACTAGATACTGCTCTACTCCAAGCATTGCTTCTTACTGGACAATCTTCAGCAGCTTTAGAAATACTAAGGGGTGTTAATTACTGCGATATGAAAATATGTGAAGAAATACTTCGAAAAGGCAACCTTAATGCTGCTTTGTTAGAACTTTACAAGTGCAAGTCATTGCACCGGCAAGCTCTTGAACTTCTTCACAAGTTGGTGGAAGAGTCAAGATCCAGCCAGTCTGAAATTACACAAAGGTTCAAGCCTGATGACATTGTTGAGTATCTCAAGCCACTATGCGAGACAGACCCCATACTTGTTCTGGAATTCTCAATGCTTGTTCTTGAAAGCTGTCCATCCCAAACTATTGAGCTCTTTCTGTCTGGAAATATACCAGCTGATATGGTGAACTCATATTTGAAGCAGCACTCTCCAAACATGCAAGCTAGGTACTTGGAGCTCATGCTTGCAATGAATGAGAATGCCATATCTGGCAATCTGCAAAATGAAATGGTAAACATCTACCTGTCTGACGTACTTGATTGGCATGCCGACTTAAATGCTCAACAAAATTGGGATGAGAAAACTTATACCCCAACTAGGAAAAAATTATTGTCGGCTTTAGAAGGTATATCGGGATATAATCCAGAGGCACTGCTGAAACGTCTTCCTCAAGATGCTTTGTATGAAGAGCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTGGCGTTATCTTTGTATGTTCATAAGCTTCATGTTCCAGAATTGGCATTATCTTATTGTGATCGGGTGTATGAGTCCACACATCAGCCATCTGTAAAAAATTCTAGCAACATATACCTATTGCTTATGCAAATCTATTTGAATCCTCGAAAGACCACAGCAAGCTTTGAAATGAGAATTACAAATCTATTATCCCCACAAAATACAGCTATTTCTAGAGGTAGTGCAACTTCTGTAAAAAGCAAAGTAGGCCGGGGATCAAAGAAAATTGCGGAGATTGAGGGTGCAGAGGACACAAAAGTTAGTTTGAGCAGCACTGACAGTAGCAGGAGTGATGGTGATGGTGATGGTGATGCAGATGAATTTAATGAGGGTGGCTCTACTATCATGCTTGATGAGGTCCTTGATCTTTTGAGCCGCAGGTGGGATAGAATAAATGGAGCTCAAGCCCTTAGACTTTTACCAAGAGAGACTAAGTTACAGGATTTGCAATCATTTCTTGGGCCCCTTTTGAGAAAATCTAGTGAAATGTACCGTAACTGTTCAGTGATCAAGAGCTTGAGACAGAGCGAGAACCTTCAGGTGAAAGATGAACTGTATAGTCAGAGGAAAGCAGTTGTGAAGATAACCAGCGATAGCATGTGTTCTTTGTGCCGAAAGAAAATAGGGACTAGTGTTTTTGCTGTCTACCCCAACGGGAGCACTCTCGTGCACTTCGTCTGTTTTAAAGATTCTCAAAATATGAAAGCAGTGACCAAAGGGTCTCAATTGAGGAAGCGATAA 2955 0.4223 MVHSAYDSIELVPNFNGKIESIESYGSKLLLGCSDGSLRIYSPETEFSDHSKPYVLEKNFANFAKKPVVSMEVVESRELLLSLSESIAFHRLPSLETIAVITKAKGANVFCWDDRRGFLAFARQKRVCIFRHDGGRGFVEVKEFGVPDMVKSMSWCGENICIGIRREYVILNASNGALSEVFTSGRLAPPLVVPLPSGELLLGKENIGVFVDQNGKLIPEGRIVWSEAPLEVVIQKPYAIALLPRFVEIRSLRQPYPLIQTIVLRNVRHLCQSSNSVILALDNSIHGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFDNGSYEEAVEHFLESQVDITYVLSLYPSIILPKTTVVHEPEKLDIDGDASYLCRDLSGVSDDMEPLPSDENAALESKKTNHNMLMALIKYLQKKRGNFIEKATAEGTEEVVLDAVGDNYASYNRFKKANKGRGNISIGSGAREMASILDTALLQALLLTGQSSAALEILRGVNYCDMKICEEILRKGNLNAALLELYKCKSLHRQALELLHKLVEESRSSQSEITQRFKPDDIVEYLKPLCETDPILVLEFSMLVLESCPSQTIELFLSGNIPADMVNSYLKQHSPNMQARYLELMLAMNENAISGNLQNEMVNIYLSDVLDWHADLNAQQNWDEKTYTPTRKKLLSALEGISGYNPEALLKRLPQDALYEERAILLGKMNQHELALSLYVHKLHVPELALSYCDRVYESTHQPSVKNSSNIYLLLMQIYLNPRKTTASFEMRITNLLSPQNTAISRGSATSVKSKVGRGSKKIAEIEGAEDTKVSLSSTDSSRSDGDGDGDADEFNEGGSTIMLDEVLDLLSRRWDRINGAQALRLLPRETKLQDLQSFLGPLLRKSSEMYRNCSVIKSLRQSENLQVKDELYSQRKAVVKITSDSMCSLCRKKIGTSVFAVYPNGSTLVHFVCFKDSQNMKAVTKGSQLRKR* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1140 984 PANTHER VACUOLAR SORTING PROTEIN 39 1 984 - -
Mal6g1140 984 Pfam Vacuolar sorting protein 39 domain 1 488 596 IPR019452 -
Mal6g1140 984 Pfam Vacuolar sorting protein 39 domain 2 859 967 IPR019453 -
Mal6g1140 984 Pfam CNH domain 26 272 IPR001180 -
Mal6g1140 984 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 591 778 IPR000547 GO:0006886|GO:0016192
Mal6g1140 984 PANTHER CNH DOMAIN CONTAINING 1 984 IPR032914 GO:0016192
Mal6g1140 984 Pfam Region in Clathrin and VPS 616 746 IPR000547 GO:0006886|GO:0016192
Mal6g1140 984 MobiDBLite consensus disorder prediction 820 849 - -
Mal6g1140 984 SUPERFAMILY WD40 repeat-like 25 183 IPR036322 GO:0005515
Mal6g1140 984 ProSiteProfiles Citron homology (CNH) domain profile. 16 277 IPR001180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1140 Mal-Chr6 17413279 17421037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1140 K20183 - gmx:100805342 1614.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1140 6 17413279 17421037 Mal6g1140 6 17413279 17421037 ECH