Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1129 ATGGCCGCCGCTAAATTAACCTCGTGCGTCGCCGTCGCCGCCGCCGCAGCGGCTTCAATCTCCACCCAATCTAAACCTGCTTATTCCGAATCTTACTTCCGTTTCCCTTTTTTCTCTTCTTCACCTTCCAATTCACCTCCTCCGACGGACCAATCATCTGACAAAAAATCCGATTCTCCGCCGCCGGAAGAACCTAACAAGTCTGGTTTTGATCCTGAATCGTTGGAAAGAGCTGCTAAAGCTCTTCGTGAAATCAATAATTCTACTCACGCTAAAAAGGTGTTTGATTTAATGCGTAAACAGGAACAAACTCGTCTTGCTGAGTTAGATGCTGAAAAAGTTAATTATGAACTTATTCAGACTCAAGGAGATATTGATAGGCTGCGTAAAATGGCTGAAGAACAACGGAATCTAATACAAGAGCAGAACCAGAGGCAGGCTCAGGTGTTACGAATTGAAGATGATTTGGCAAGAAAAAGAATGCAGACAGATCATGAAGATCAAAGGCGCCATAATGTTGAGTTGGTCCAGATGCAAGAGAAATCTTTTGTAAGAAAGGAGCAGGAAAGGCAGGATACTGAAAAAAAAAATCAAGCTCAGCAAATTCAGACTTTGAAAAATAAAGCTGAAATAGAGAGAAACAACGCTAAAGCTAAGGAAGATGCAGAGGCTGAAGGCCGAATCCTTTATGCAAAATCGACTGAGGAAGAAAGAATGAGAGAGCTTAAAGAGAAAATGCAGGGGGAAAGGGATAAATGGATTGCTGCAATTAACGCTACTTTTAGTCATATTGAAGGCGGTCTGAGGGTCTTATTGACTGATAGGGACAAATTGCTTATGACTGTTGGAGGAGCTACTGCATTAGCTGCAGGAGTATATACGACTAGAGAAGGTGCAAAAGTTACATGGGGCTATATTAATCGGATCTTGGGGCAGCCATCATTGATCCGGGAATCATCCATGGCAAAGTTTCCTGGATCAAGGATCATGTCTCAAGCCAAAAATAAAGTTTTAAATTATAGTACCTTAGCCAGGGCAGAAAAGCCTGTTGGGAGTCAAAATGGTCTTGGAAATGTAATCTTGCATCCCTCATTGCAGAGAAGAATAGTGCATCTAGCACGGGCAACATCAAATACCAAGGCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGGCCTCCTGGAACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGGTTGGATTATGCAATGATGACCGGAGGAGATGTTGCACCTCTGGGCCCACAGGCTGTTACCAAAATTCATGAGATATTTGATTGGGCCAAGAAATCTAAAAGAGGCCTATTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCTCACACATGAGTGAAGCTCAACGAAGCGCCCTAAATGCGTTGCTTTTCAGAACCGGCGATCAGTCTAGAGATATAGTACTTGTGCTTGCTACAAACAGACCAGGAGATCTTGATAGTGCAATTACTGATCGCATTGATGAAGTGATTGAATTCCCACTTCCAGGAGAGGAGGAACGTCTTAAGTTATTGAATCTCTATTTGAACATGTATCTATGTGATGAAAGTAATGGGTCCACGGGGGGATTATTTCTGAAGAAGCAGCCCCAGAAGATTACCATAAAAGATTTATCTGAAGATGTGCTGAAAGAGGCTGCCAAGAAAACAGAGGGATTTTCAGGCCGTGAGCTAGCCAAACTCATGGCTAGCGTCCAAGCTGCTGTCTATGGGCGCCCTGACTGCGCCTTAGATTCTCAGCTGTTTAGAGAAATTGTCGATTACAAGGTGGTGGAACATCATCAGCGGTTAAAACTGGCAGCTGAGGGCGGCCTCCCTGCCTAA 1887 0.4377 MAAAKLTSCVAVAAAAAASISTQSKPAYSESYFRFPFFSSSPSNSPPPTDQSSDKKSDSPPPEEPNKSGFDPESLERAAKALREINNSTHAKKVFDLMRKQEQTRLAELDAEKVNYELIQTQGDIDRLRKMAEEQRNLIQEQNQRQAQVLRIEDDLARKRMQTDHEDQRRHNVELVQMQEKSFVRKEQERQDTEKKNQAQQIQTLKNKAEIERNNAKAKEDAEAEGRILYAKSTEEERMRELKEKMQGERDKWIAAINATFSHIEGGLRVLLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIMSQAKNKVLNYSTLARAEKPVGSQNGLGNVILHPSLQRRIVHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSKRGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPGEEERLKLLNLYLNMYLCDESNGSTGGLFLKKQPQKITIKDLSEDVLKEAAKKTEGFSGRELAKLMASVQAAVYGRPDCALDSQLFREIVDYKVVEHHQRLKLAAEGGLPA* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1129 628 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Mal6g1129 628 PANTHER PUTATIVE ATP-ASE 1 625 IPR039188 GO:0005739|GO:0007005
Mal6g1129 628 MobiDBLite consensus disorder prediction 39 74 - -
Mal6g1129 628 CDD AAA 381 516 - -
Mal6g1129 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 611 IPR027417 -
Mal6g1129 628 MobiDBLite consensus disorder prediction 179 202 - -
Mal6g1129 628 Gene3D - 332 534 IPR027417 -
Mal6g1129 628 MobiDBLite consensus disorder prediction 39 55 - -
Mal6g1129 628 SMART AAA_5 385 518 IPR003593 -
Mal6g1129 628 Coils Coil 232 252 - -
Mal6g1129 628 Coils Coil 183 222 - -
Mal6g1129 628 Pfam ATPase family AAA domain-containing protein 3, N-terminal 52 317 IPR021911 -
Mal6g1129 628 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Mal6g1129 628 MobiDBLite consensus disorder prediction 179 196 - -
Mal6g1129 628 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 625 - -
Mal6g1129 628 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1129 Mal-Chr6 17253305 17261489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1129 387 592 Miscellaneous Gene Families AT5G53170 32.093 1.24e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1129 K17681 - gmx:100777755 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1129 6 17253305 17261489 Mal6g1129 6 17253305 17261489 ECH