Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1095 ATGATGTTTTCTCAAAGAGAAATGCCTTCACCATCTTCAATTTTCTCAGCTTATGCATCCATGACAGCTTTGATCATGCTACTTCGTTCCATAGCTCACGAACTCATACCTCAACCAATTCGTGAATACCTTATCAACACTTTTCATTACCTCGTAAAACCACGTTCTACACTCACACTCATCATAGAAGAATCATCCGGCATAACTCGTAACGAAGTCTTCGATGCTGCAGAGACTTATCTCTCCACAAAAGTCACCCTTGAAAACGAAAGACTCAAAATTAGCAAAGCCCCAAAAGAGAAAAAACTCACAATTCGGTTAGAAAAAGGCGAAAAATTAACCGATATTTATAACGGGTTTGCGCTCATATGGAGATTCATTTGTGTTGAAACAGAGAAAAACAGTGCAAATGATATGCACAACAATAATAACAGTATATCTGTTAGATCAGAAAAAAATTATTTTGAACTTAGTTTTCACAAAAAGTATAAGGAAATAGTTTTCGAATCTTATCTTCCTTTTATTCTTGATAAAGCTAAAGAAATGAAAGATGAAGAAAGGGTGTTAAAAATGCATACTTTAGATTCTTTTTATTATGACAAAGGTGTGAAATGGGACTCTATAAACCTTGAACACCCTTCAACATTTGAAACACTTGCTATGGAACCAGAAATGAAGAATTTGATTATAAAAGATTTGAACATGTTTGTGAAGAGAAGGGAGTTTTATAAGAAAGTTGGTAAGGCTTGGAAACGTGGTTATTTGTTGTATGGTCCTCCTGGTACTGGAAAATCTAGTTTAGTTGCTGCTATGGCTAATTATTTGAAGTTTGATATATTTGATCTTCAACTTGGGAACATTGTTAGAGATTTTGATCTTAGAAAGGTCCTTCTTGCTACTGCTAATAGGTCTATTTTGGTTATTGAAGATATTGATTGCAGTGTTGATATTCCTAAGAGGCATGGAGAAGGACGTAAACAAAATGATATACAGTTGACATTATCTGGATTACTGAACTTCATAGATGGATTATGGTCAAGTTGTGGAGACGAGAGAATCATCATATTTACAACAAACCACAAAGAAAAATTAGATCCAGCACTTTTAAGGCCAGGAAGAATGGACATACACATTCACATGACCTATTGTTCTTATGAAGGTTTCAAAATTTTGGCCTCAAATTACTTGGAAATTTCTCATGATAACCCCTTCTTTGGAGAGATAGAAGGACTAATAAAAGACATACAGATAACACCAGCACAAGTGGCAGGGGAATTGATGAAGAAAGAAGACGCAGAGGCGGAGGCGACGATTGAAGAATTTGTGAAATTACTTAAGCAGAAGAAGATGGCCGGTTGA 1359 0.3539 MMFSQREMPSPSSIFSAYASMTALIMLLRSIAHELIPQPIREYLINTFHYLVKPRSTLTLIIEESSGITRNEVFDAAETYLSTKVTLENERLKISKAPKEKKLTIRLEKGEKLTDIYNGFALIWRFICVETEKNSANDMHNNNNSISVRSEKNYFELSFHKKYKEIVFESYLPFILDKAKEMKDEERVLKMHTLDSFYYDKGVKWDSINLEHPSTFETLAMEPEMKNLIIKDLNMFVKRREFYKKVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDIFDLQLGNIVRDFDLRKVLLATANRSILVIEDIDCSVDIPKRHGEGRKQNDIQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKEKLDPALLRPGRMDIHIHMTYCSYEGFKILASNYLEISHDNPFFGEIEGLIKDIQITPAQVAGELMKKEDAEAEATIEEFVKLLKQKKMAG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1095 452 Gene3D - 203 378 IPR027417 -
Mal6g1095 452 PANTHER BNAA10G17020D PROTEIN 7 449 - -
Mal6g1095 452 ProSitePatterns AAA-protein family signature. 352 370 IPR003960 GO:0005524|GO:0016887
Mal6g1095 452 CDD AAA 251 382 - -
Mal6g1095 452 Pfam ATPase family associated with various cellular activities (AAA) 255 381 IPR003959 GO:0005524|GO:0016887
Mal6g1095 452 Gene3D - 379 450 - -
Mal6g1095 452 Pfam Domain associated at C-terminal with AAA 36 127 IPR025753 -
Mal6g1095 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 444 IPR027417 -
Mal6g1095 452 SMART AAA_5 250 384 IPR003593 -
Mal6g1095 452 PANTHER BCS1 AAA-TYPE ATPASE 7 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1095 Mal-Chr6 16630344 16634657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1095 243 426 Miscellaneous Gene Families AT3G02450 35.204 4.23e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1095 - - gmx:100789621 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1095 6 16630344 16634657 Mal6g1095 6 16630344 16634657 ECH