Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1079 ATGGCAGGTTCATCAGAAGAGGGACAAGTAATCAGCTGTCACACCGTTGATGCATGGAACGATATCCTCCATAGGGGCAATGAATCCAAGAAACTGATTGTTGTGGATTTTACTGCTTCTTGGTGTGGACCATGCCGTTTCATTGCACCATTCCTTGCTGAGTTGGCCAAGAAGTATACAAATGCCATATTCATTAAGGTGGATGTGGACGAATTAAAGTCTGTTGCTCAAGATTGGGCTGTTGAGGCTATGCCAACTTTCGTGTTTGTGAAAGAAGGAACAATTTTGGGCAAAGTGGTAGGTGCAAAGAAAGATGAGCTGACACAGACAATAGAGAAACATGTGGCATCAGCCAGTGCTTAA 363 0.438 MAGSSEEGQVISCHTVDAWNDILHRGNESKKLIVVDFTASWCGPCRFIAPFLAELAKKYTNAIFIKVDVDELKSVAQDWAVEAMPTFVFVKEGTILGKVVGAKKDELTQTIEKHVASASA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1079 120 PRINTS Thioredoxin family signature 41 50 - -
Mal6g1079 120 PRINTS Thioredoxin family signature 80 91 - -
Mal6g1079 120 PRINTS Thioredoxin family signature 33 41 - -
Mal6g1079 120 Pfam Thioredoxin 13 113 IPR013766 -
Mal6g1079 120 ProSiteProfiles Thioredoxin domain profile. 1 116 IPR013766 -
Mal6g1079 120 SUPERFAMILY Thioredoxin-like 7 117 IPR036249 -
Mal6g1079 120 CDD TRX_family 28 112 - -
Mal6g1079 120 PANTHER THIOREDOXIN 5 119 - -
Mal6g1079 120 PANTHER THIOREDOXIN H-TYPE-LIKE ISOFORM X1 5 119 - -
Mal6g1079 120 ProSitePatterns Thioredoxin family active site. 34 52 IPR017937 -
Mal6g1079 120 Gene3D Glutaredoxin 2 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1079 Mal-Chr6 16460575 16463111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1079 K03671 - gmx:100499701 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1079 6 16460575 16463111 Mal6g1079 6 16460575 16463111 ECH