Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1071 ATGAAATCTCTAAACTTCCTTCTATTTTCACTCATCTTAGCCTCAACAACATTACTCAAAAACACAGAATCAAAAACACATTGGTCAGACACAAAATCCTTAAAACAACTCAAACAAAACATAAACCTTAATTCATTAACCCCAGGCTCATGCATCAGTACCTGGGACTTCACCTTCGACCCATGTGACAACCTCTTCAGCCAAAAATTCACCTGTGGATTCAGATGTGACACCATCATCTCCAATCTCAGCCGTGTCACCGAACTCAGTCTCGACCAAGCTGGTTACTCCGGTTCACTCTCCTTAAACATTCTACCTTATCTCAACACACTAGATGTTTCAAACAATTACTTCACTGGTAACATACCAGAATCTTTGTCTAAATTAACTCGTTTGAATAGACTCAGTCTTTCATCAAACTCTTTCAGTGGTGAAATACCATATTCCATTGGATCTCTCACAAATCTTCAAGAGTTGTATCTTGATAACAACAATCTTCAAGGAAAGGTTCCTTCAAGTTTCAACAATCTTAAAAGCTTAACTAGGCTTGAACTTCAACAAAACAAGCTCACAGGAAAAATACCTGATTTGGGTTCTCTTGAAAATCTCTACTACATGGATCTTAGTAATAATGGGTTTTCAATTTCCGGTGACCCATTTGTATTTCCGGTTTCTTTAGTTCAGATTTCAATCAGGAACAATAATTTAAGCGGTGGTTTAGTTTCTGAAAGCTTCAAGAATTTGAATTATTTGCAGGTTGTTGATTTTAGTTCAAACAAAATCAATGGCTATGTTCCTTCTATTTTCTTTCAGCTTCCATCTTTACAACAGTTAACACTTTCATTCAACGAATTTTCTTCCATTGAAGCTCCTTATGGAACAAATTCACTTCAAAGTGAGCTTATAGCTGTTGATTTGAGTAATAATCAGCTACAAGGTTTTTTACCTGCGTTTTTAGCTACGATGCCTAAGCTTTCATCTTTGTCTTTGGAGAATAACCGGTTCACCGGTTTGATACCGGTTCAGTTTGCATTGAAGACTGTTTTTCCTGAAACAGGAATGGCTCCTTTTGGGAGACTTTTGTTGGGTGGAAATTATTTGTTTGGTGGGATACCTCGTCCTTTGCTTGTTCTTAATCAAGATTCTGCTAATGTGAGTTTAGTTGATAATTGTTTGTTTAGGTGTCCTCATGTTTTCTTTTTTTGTCAAGGTGGAACACAGAAATCTTCTTCAGAATGTAGTAGTGTAATTATTCCTTAG 1260 0.3651 MKSLNFLLFSLILASTTLLKNTESKTHWSDTKSLKQLKQNINLNSLTPGSCISTWDFTFDPCDNLFSQKFTCGFRCDTIISNLSRVTELSLDQAGYSGSLSLNILPYLNTLDVSNNYFTGNIPESLSKLTRLNRLSLSSNSFSGEIPYSIGSLTNLQELYLDNNNLQGKVPSSFNNLKSLTRLELQQNKLTGKIPDLGSLENLYYMDLSNNGFSISGDPFVFPVSLVQISIRNNNLSGGLVSESFKNLNYLQVVDFSSNKINGYVPSIFFQLPSLQQLTLSFNEFSSIEAPYGTNSLQSELIAVDLSNNQLQGFLPAFLATMPKLSSLSLENNRFTGLIPVQFALKTVFPETGMAPFGRLLLGGNYLFGGIPRPLLVLNQDSANVSLVDNCLFRCPHVFFFCQGGTQKSSSECSSVIIP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1071 419 Pfam Leucine rich repeat 226 284 IPR001611 GO:0005515
Mal6g1071 419 Pfam Leucine rich repeat 106 166 IPR001611 GO:0005515
Mal6g1071 419 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 415 - -
Mal6g1071 419 SMART LRR_typ_2 322 345 IPR003591 -
Mal6g1071 419 SMART LRR_typ_2 177 200 IPR003591 -
Mal6g1071 419 SMART LRR_typ_2 272 293 IPR003591 -
Mal6g1071 419 SMART LRR_typ_2 153 176 IPR003591 -
Mal6g1071 419 Gene3D Ribonuclease Inhibitor 195 296 IPR032675 -
Mal6g1071 419 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 415 - -
Mal6g1071 419 Gene3D Ribonuclease Inhibitor 297 392 IPR032675 -
Mal6g1071 419 Gene3D Ribonuclease Inhibitor 28 194 IPR032675 -
Mal6g1071 419 ProSiteProfiles Leucine-rich repeat profile. 179 201 IPR001611 GO:0005515
Mal6g1071 419 SUPERFAMILY L domain-like 72 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1071 Mal-Chr6 16295027 16296286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1071 74 343 Receptor kinase-like Gene Family AT3G28040 32.130 1.72e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1071 - - gmx:100811366 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1071 6 16295027 16296286 Mal6g1071 6 16295027 16296286 ECH