Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1041 ATGGCTATAAAAAAATCCAACAAACTACCACAAGCTGAAGTTATAAAGCAAATTGTCAAAAGATGTTCAAGTTTTGGCAAAAGGCAGAGTTACAATGAAGAGGGTCTTCCTGAGGATGTACCAAAAGGTCATTTTGCAGTTTATGTTGGGGAGAATAGGACTAGATATATTATCCCAATTTCTTGGTTGGCACATCCTCAATTTCAAAGTTTGCTACAAAGAGCTGAAGATGAATTTGGTTTCAATCATGATATGGGACTTACTATCCCTTGTGATGAAGGTTTTTTTGAGTCCTTAACTTCAATGATGAGGTAA 315 0.3587 MAIKKSNKLPQAEVIKQIVKRCSSFGKRQSYNEEGLPEDVPKGHFAVYVGENRTRYIIPISWLAHPQFQSLLQRAEDEFGFNHDMGLTIPCDEGFFESLTSMMR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1041 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Mal6g1041 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Mal6g1041 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1041 Mal-Chr6 15633334 15633648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1041 5 103 Calmodulin-binding Proteins AT4G34750 41.414 6.57e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1041 K14488 - gmx:100798840 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1041 6 15633334 15633648 Mal5g3347 5 97198952 97199269 ECH
Mal2g0495 2 5779816 5780136 Mal6g1041 6 15633334 15633648 ECH
Mal6g1041 6 15633334 15633648 Mal6g1041 6 15633334 15633648 ECH
Mal7g2642 7 88533291 88533608 Mal6g1041 6 15633334 15633648 ECH