Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1018 ATGGCTGCTGCAGTAACAGCCGCCGTCTCTTTTCCTTACTCCAACTCCACTTCTCTTCCCATCAGGACATCTGTTATTTCCCCTGAGAGACTTGTCTTCAAGAAGGTTTCATTGAATAATAATAATGTTTCTATAAGTGGAAGGGTAGGAATCATCAGAGCTGAAGTTGCTACGGAAGCACCTGCTCCTGTTAAGGTAGAAAAGATATCAAAGAAACAGGAGGAAGGTATTGTTGTGAACAAGTTCAAACCCAAGAATCCATACATTGGGAGGTGTCTTCTCAACACAAAGATCACTGGTGATGATGCACCTGGTGAAACTTGGCACATGGTTTTCACCACTGAGGGAGAGGTTCCTTACAGAGAAGGACAATCGATTGGGATAATTCCAGATGGTATTGACAAGAACGGAAAGCCTCACAAGCTGAGATTGTATTCAATTGCTAGCAGTGCCATTGGTGATTTTGGAGACTCCAAAACTGTTTCTCTATGCGTGAAACGTCTTGTGTACACAAATGATGCCGGAGAAGTTGTTAAGGGAGTCTGCTCAAATTACTTGTGCGACTTGAAGCCTGGATCTGAAGTACAGATTACTGGCCCAATTGGTAAAGAAATGCTTATGCCAAAAGATCCTAACGCCACCGTCATCATGTTGGGAACTGGAACTGGAATCGCCCCATTTCGCTCATTTTTATGGAAAATGTTCTTCGAGAAGCATGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTAGGTGTCCCCACAAGCAGCTCTCTGCTTTATAAGGAGGAGTTTGAAAAGATGAAGGAGAAAGCACCTGAGAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAACAAGTAAACGACAAAGGAGAGAAAATGTACATCCAAACCAGAATGGCTCAATATGCCGAAGAGTTGTGGGAATTACTGAAGAAAGACAACACTTTTGTTTACATGTGTGGACTGAAAGGAATGGAAAAGGGAATTGATGACATAATGGTTTCACTCGCTGCCAAAGAAGGTATCGATTGGATCGAGTACAAGAGACAGTTGAAGAAGGCAGAGCAATGGAATGTTGAAGTCTATTGA 1095 0.4274 MAAAVTAAVSFPYSNSTSLPIRTSVISPERLVFKKVSLNNNNVSISGRVGIIRAEVATEAPAPVKVEKISKKQEEGIVVNKFKPKNPYIGRCLLNTKITGDDAPGETWHMVFTTEGEVPYREGQSIGIIPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNYLCDLKPGSEVQITGPIGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKEGIDWIEYKRQLKKAEQWNVEVY* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1018 364 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 85 207 IPR017927 GO:0016491
Mal6g1018 364 PIRSF FNR-PetH 2 364 IPR035442 GO:0016491
Mal6g1018 364 Pfam Oxidoreductase NAD-binding domain 217 331 IPR001433 GO:0016491
Mal6g1018 364 Pfam Oxidoreductase FAD-binding domain 140 203 IPR008333 -
Mal6g1018 364 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 210 364 IPR039261 -
Mal6g1018 364 Gene3D - 202 364 IPR039261 -
Mal6g1018 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 120 130 IPR001709 GO:0016491
Mal6g1018 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 258 269 IPR001709 GO:0016491
Mal6g1018 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 318 326 IPR001709 GO:0016491
Mal6g1018 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 180 189 IPR001709 GO:0016491
Mal6g1018 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 246 255 IPR001709 GO:0016491
Mal6g1018 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 143 150 IPR001709 GO:0016491
Mal6g1018 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 294 310 IPR001709 GO:0016491
Mal6g1018 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 216 235 IPR001709 GO:0016491
Mal6g1018 364 CDD CYPOR_like_FNR 80 364 - -
Mal6g1018 364 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 364 - -
Mal6g1018 364 Gene3D Translation factors 55 201 - -
Mal6g1018 364 SUPERFAMILY Riboflavin synthase domain-like 68 208 IPR017938 -
Mal6g1018 364 PIRSF Frd-NADP+_RD 1 364 IPR015701 GO:0016491
Mal6g1018 364 PANTHER - 1 364 IPR015701 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1018 Mal-Chr6 15195653 15198907 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1018 K02641 - gmx:100798467 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1018 6 15195653 15198907 Mal6g1018 6 15195653 15198907 ECH