Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0995 ATGATGCTCGACGGAACTGAAGACGAAGAAAAGTTCCTCGCCGCCGGTATCGCCGGTCTTCAACAGAATTCATTCTACATGCACCGTGCATTGGATTCGAACAATCTCAGAGATGCTTTGAAATATTCGGCTCAGATGCTTTCGGAACTTCGGACTTCCAAGCTTTCTCCTCACAAATACTACGAACTATATATGCGTGCTTTTGATCAATTGAGGAAGCTGGAGATGTTCTTCGAGGAAGAGACGCGTCGCGGTTGCTCCATTATTGATCTTTACGAGCTTGTTCAGCATGCCGGCAACATTTTGCCGCGATTGTATCTCCTCTGTACAGTAGGATCTGTATACATCAAATCAAAGGAAGCTCCTGCTAAGGATGTTCTTAAGGATCTTGTGGAGATGTGTCGTGGCATTCAGAACCCTGTTCGTGGACTCTTTCTCAGAAGTTATCTTTCTCAAGTTAGTAAGGATAAATTGCCGGATATTGGTTCTGAGTATGAAGGGGATGCAGATACTGTATCAGATGCTGTAGAGTTTGTACTCCAAAATTTCACAGAAATGAACAAACTTTGGGTGCGGATGCAACATCAGGGGCCTTCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAATGAGCTGCGAGATCTTGTTGGGAAGAATCTCCATGTTCTCAGTCAGATAGAGGGCGTTGACCTTGAGATGTACAAAGATGTTGTGCTTCCTAGAGTACTGGAGCAGGTCGTGAATTGCAAAGATGAGTTGGCCCAATTCTACTTGATGGATTGCATAATTCAAGTCTTCCCTGATGAGTATCACTTGCAAACACTTGATGTGTTGTTGGGCGCTTACCCTCAACTTCAGCCATCTGTTGACATCAAGACAGTACTATCCCAGTTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCAGAGGTTTTGCCCGAGTTTTTGCAGGTGGAAGCATTTTCCAAATTAAGCAATGCAATTGGCAAGGTGATAGAGGCACAGCCTGACATGCCCACTGCTGGAGTTGTAACTTTATATTCATCTCTTCTTACCTTCACTCTTCATGTCCACCCCGATCGACTAGATTATGCCGATCAAGTCATGGGAGCATGCGTGAAAAATCTCTCTGGCAAAGGTAAAATTGAAGACAAGAAGGCCACCAAGCAGATTGTTGCTTTATTAAGTGCTCCACTAGAGAAATATAATGACATTATGACCGCCTTGAAGCTTTCAAACTATCCTCGTGTAATGGAATTCCTTGACATTCCAACTAATAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGCAACAAGCATTTCTACTTCAGACAAGGTTGAAGCATTGTTTGAACTGATAAAGGGGCTTATCAAGGATTCTGATGGGACTCCTGATGATGAGCTGGATGAAGATGATTTCAAAGAGGAGCAGAATTCTGTTGCACGTCTTATCCAGATGCTTTATAATGAGGATCCAGAAGAGATGTTTAAGATCATTGAAACTGTGAGGAAGCATATACTGACTGGAGGACCAAAGCGTCTGCCTTTCACTGTTCCACCTCTTATGTTTTCTTCTTTAAAGTTGGTCAGGCAGTTGCAAGGTCAAGGTCAAGAAGAAAATCCTTTTGGAGATGATGCGTCAACATCACCAAAGAAAATATTCCAGCTTTTAAATCAGACCATCGAGACTCTGTCAGGTGTCCTGGCACCAGAGTTAGCATTGCAGTTGTGCTTGCAATGTGCTGAGGCTGCAAATGACTGTGAGTTGGAACCAGTTGCATATGAATTTTTTACGCAAGCTTATATTCTATATGAAGAAGAAATTTCTGATTCCAGAGCACAGGTCACAGCTATCCATTTAATAATAGGAACTCTTCAAAGGATGCATGTCTTTGGTGTTGAGAACAGGGATACTTTAACTCACAAGGCCACAGGGTATTCAGCAAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCTGTGTATGCGTGCTCACATTTGTTTTGGGTTGATGATCATGACAACATGAAAGATGGAGAGAGAGTCCTATTATGCCTGAAGCGGGCTTTAAGGATTGCAAATGCTGCACAACAAATGGCAAATGCAGCACGAGGCAGCACCGGATCAGTAATGCTCTTCATTGAGATTTTGAACAAGTATCTATACTTCTTTGAGAAGGGGAACCCACAAGTCACAGTTGCTTCTATCCAGGGCCTAATTGAATTAATTATGAATGAAATGCAAAGTGACACCGCAACTCCAGATCCATCTGCAGATGCTTTCTTAGCCACTACTATGCGCTATATACAGTTCCAAAAACAAAAGGGTGGTACAGTTGGTGAGAAATATGAGCCGATCAAGGTTTGA 2379 0.4258 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQNPVRGLFLRSYLSQVSKDKLPDIGSEYEGDADTVSDAVEFVLQNFTEMNKLWVRMQHQGPSREKEKREKERNELRDLVGKNLHVLSQIEGVDLEMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQPSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTAGVVTLYSSLLTFTLHVHPDRLDYADQVMGACVKNLSGKGKIEDKKATKQIVALLSAPLEKYNDIMTALKLSNYPRVMEFLDIPTNKVMATVIIQSIMKNATSISTSDKVEALFELIKGLIKDSDGTPDDELDEDDFKEEQNSVARLIQMLYNEDPEEMFKIIETVRKHILTGGPKRLPFTVPPLMFSSLKLVRQLQGQGQEENPFGDDASTSPKKIFQLLNQTIETLSGVLAPELALQLCLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNPQVTVASIQGLIELIMNEMQSDTATPDPSADAFLATTMRYIQFQKQKGGTVGEKYEPIKV* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0995 792 PIRSF Retromer_Vps35 2 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mal6g0995 792 Pfam Vacuolar protein sorting-associated protein 35 13 749 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mal6g0995 792 PANTHER VACUOLAR SORTING PROTEIN 35 2 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mal6g0995 792 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 792 - -
Mal6g0995 792 SUPERFAMILY ARM repeat 224 753 IPR016024 -
Mal6g0995 792 Gene3D - 465 777 IPR042491 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0995 Mal-Chr6 14904456 14916136 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0995 K18468 - gmx:100811902 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0995 6 14904456 14916136 Mal6g0995 6 14904456 14916136 ECH