Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0901 ATGACCGAAACCCTAGAATCCTCATCCTACCCTCCAATAGATCCAATCAACTTCGATCTCATCATCGTCGGCACCGGCCTTTCCGAATCCGTCATCGCCGCCGCCGCATCCGCCGTCGGAAAAACCATCCTCCACCTCGACCCTAACTCATTCTACGGTAGCCATTTCGCTTCTCTCTCCCTCGAAGATCTCACCTCTCACCTCAATTCCCTTTCCAAATCCATCACCTCCACCTCCACCTCCACCGCCGCTACCGCTTCATCCGACTACACCGTCGTAAACCTCATCCAACAACCTCTATTCTCCGACGCGGAGTTCAATTCATGCGATTCTATCGACGAATCCCAATTTCTTCGTGAAAATTCGAGAAAGTTCAATCTCGATTTAGCAGGACCTAGGGCATTATTCAGCGCGGACAAAACAATCGATTTGTTGTTGAAATCAGGTGCTGCACAGTACTTGGAATTCAAAGGAATCGATGCAAGTCTTGTTTACGATGCTAATGAGGGTTTGGTGAATGTTCCGGATTCACGTGGAGCGATTTTTAGAGATAAGAATCTTTCGCTTAAGGAGAAGAATCAATTGATGAAATTCTTCAAGCTTGTTCAGCAACACTTGGGTGGTAGTGAGGATGAGAAGATTTCGGAGGATGATATGGAGAGTTCGTTTGTTAGTTTCTTGGAGAAAATTGGTTTGCCGCCGAAGATAAAAGCGATTCTTTTGTATGCTATAGCCATGGTAGATTTTGATCAAGAAAATGGTGGGGTTTGTAAAGACTTGCTGAAAACAAAAGATGGAATAGATCGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCCAATGCACCAGGGGCTTTGCTTTATCCTATTTATGGTGAAGGAGAACTACCACAAGCTTTTTGTCGCCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTCAGAATGCCGGTTATTTCCCTGCTTATGGATAAGGATACTGGGTCGTATAAGGGTGTTAGATTAGCTTCAGGTCAGGATTTATATAGTCATAAGCTAATCCTGGACCCTTCCTTCCTGATTTCATCAACTCCGTCTTTGTCTCCTAAAGATTTTTCCATTGAAACACTCCAGATGTTGAGTCAGTTAGATATTAAAGGAATGGTTGCTAGGGGAATATGCATCACAAGGAGTTCTATAAAGCCAGATGTATCAAATTGCTCTGTGGTGTATCCTCCTAGATCTCTGTATCCTGATCAGGTTACATCAATCAGGGCTCTTCAGATAGGATCAAATCTTGCTGTTTGTCCCGCGGGCACCTTTGTTTTATACTTTTCCACTCTGTGCAATGATGCCGATGAAGGAAAGAAGTTACTAAAAGCATCGATGAATGCTCTTCTTACACTGCCTGTATCTGGAAACACAGAAAGTACTCCCAACGTTCAAAGTGACAGTGAAGATAAAAAACCTGTTGTGCTCTGGAGTGCATTTTATATTCAAAAATTAACCACGAGTAAATTTGAAGCTATCAGTTCCACTCTGACACCAGATGGAAATCTAAACTACAATGACCTGTTAGACGCAACTGAGAAGCTATTTGGTCAAATGTACCCTGATGAGGAATTCTTTCCCAAGACGGCATCCCCTGAAGATACCATGGATGATGATGATAATGGGATAATTATGGAGAACTAA 1674 0.4307 MTETLESSSYPPIDPINFDLIIVGTGLSESVIAAAASAVGKTILHLDPNSFYGSHFASLSLEDLTSHLNSLSKSITSTSTSTAATASSDYTVVNLIQQPLFSDAEFNSCDSIDESQFLRENSRKFNLDLAGPRALFSADKTIDLLLKSGAAQYLEFKGIDASLVYDANEGLVNVPDSRGAIFRDKNLSLKEKNQLMKFFKLVQQHLGGSEDEKISEDDMESSFVSFLEKIGLPPKIKAILLYAIAMVDFDQENGGVCKDLLKTKDGIDRLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVISLLMDKDTGSYKGVRLASGQDLYSHKLILDPSFLISSTPSLSPKDFSIETLQMLSQLDIKGMVARGICITRSSIKPDVSNCSVVYPPRSLYPDQVTSIRALQIGSNLAVCPAGTFVLYFSTLCNDADEGKKLLKASMNALLTLPVSGNTESTPNVQSDSEDKKPVVLWSAFYIQKLTTSKFEAISSTLTPDGNLNYNDLLDATEKLFGQMYPDEEFFPKTASPEDTMDDDDNGIIMEN* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0901 557 PIRSF Rab_ger_ger_transf_A_euk 77 557 IPR001738 GO:0005968|GO:0006886|GO:0018344
Mal6g0901 557 PIRSF Rab_ger_ger_transf_A_euk 1 116 IPR001738 GO:0005968|GO:0006886|GO:0018344
Mal6g0901 557 Gene3D - 15 535 IPR036188 -
Mal6g0901 557 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 174 286 - -
Mal6g0901 557 PANTHER RAB GDP-DISSOCIATION INHIBITOR 14 544 IPR018203 GO:0005092|GO:0007264
Mal6g0901 557 MobiDBLite consensus disorder prediction 536 557 - -
Mal6g0901 557 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 14 544 - -
Mal6g0901 557 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 90 495 - -
Mal6g0901 557 SUPERFAMILY FAD-linked reductases, C-terminal domain 379 495 - -
Mal6g0901 557 SUPERFAMILY FAD/NAD(P)-binding domain 15 355 IPR036188 -
Mal6g0901 557 PRINTS Rab GDI/REP protein family signature 141 157 IPR018203 GO:0005092|GO:0007264
Mal6g0901 557 PRINTS Rab GDI/REP protein family signature 191 206 IPR018203 GO:0005092|GO:0007264
Mal6g0901 557 PRINTS Rab GDI/REP protein family signature 293 314 IPR018203 GO:0005092|GO:0007264
Mal6g0901 557 PRINTS Rab GDI/REP protein family signature 19 37 IPR018203 GO:0005092|GO:0007264
Mal6g0901 557 PRINTS Rab GDI/REP protein family signature 37 54 IPR018203 GO:0005092|GO:0007264
Mal6g0901 557 Pfam GDP dissociation inhibitor 120 457 IPR018203 GO:0005092|GO:0007264
Mal6g0901 557 Pfam GDP dissociation inhibitor 17 71 IPR018203 GO:0005092|GO:0007264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0901 Mal-Chr6 13552156 13558191 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0901 K23460 - gmx:100795946 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0901 6 13552156 13558191 Mal6g0901 6 13552156 13558191 ECH