Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0895 ATGGCGACGATAAGACCTTTACCTGAATCTGTTCGTAGCTCAATTCGTTCTGCATTTTCCATATTCGACTTCACAAGAATCGTGGAAGAACTTGTCTACAATAGCCTCGACGCTCGCGCTACAAAGGTATCAGTGTTTGTTGATATTGGAAGCTGCTACTTGAAAGTAGTTGATGATGGAGGTGGAATTACTCGAGATGGACTGGAATTGGTGGGAGAAAGATATGCTACATCAAAATTTCTTAATTTGGCTGACCTGAATGCTACGAGTGGAAACTTTGGTTTTCGTGGTGAAGCTTTAGCTTCCATTTCTGAAGTCTCTTTGTTGCAAATAGTGACAAGAGCCTATGGACGGCCAAATGGATATAGAAAAGTATTGAAGGGGTGCAAGTGTATATATCTTGGTATTGATGATGATAGAAAGGAAGTAGGCACAACAGTCATTGTCTGTGAAATATTTTACAACCAACCAGTTCGGAGGAAACACATTCAATCCAGCCCCAATAAGGTACTTCAATCAATCAAGAAATGTGTGATGCGGCTTGCACTCGTGTGCCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGACCGGATGAGCTTTTCTGCTCACATTCTGCTGCTTCTCCACTGTCACTTGTAACCACTGGCTTTGGGGTGGAGGTCACAAACTCTCTTCATGAATTAGAAGTTGAAAATGATATCATAAAGCTTACTGGATACATATCAGGCCCTTGCAATACCCTGGATATGAAGGCCTTACAGTATCTCTATATTAACTCACAGTTCGTTTGCAAGGGACCTGTTCATAAGCTTTTAAACCAATTGGCTATTAGGTTTGAGCATCGTAACTCGTGGAGTTCTGATAATGAATGCCAAAACAAGAAGAGAGGCAGATCTCAACCATGTCCGGCATATATCTTGAATTTAAGGTGCCCCCGCTCTTTATATGTTTTGAGCTTTGAGCCGTCAAAAACTTATGTTGAATTCAAGGATTGGGCTCCAATACTAAACTTCATTGAAAAGGTCATCAAACAGTTCTGGGAGGGAAGTATAGCTTGTGGAGATTCCTCCAATAAAGCCACTTATATGGTTCAAGATCAACGAGAGAAAGTAGATGCAGATGTCAACACCATTTCAGCAGAAGCAGATATATCAAAGTTTGGAAGCCAAAATCGTAAGGATTGTTTAGACCTCTTCTTTTCCACTTCAGACAAGCTAAATGAAGATGACAATCATCAGTGCTACAGGGAGGATGTGATAGCCTCTGTTGCTTACTTACAACGAGGGACCAAGATCCTCAAAGAGAAACAAAATAAGGGAGGCTTTCTTTGTCAGACCGGTTATTCTGGCAATTTACTGGATGTTTCATACGCCAAAAGCATGTCCACTATTATGAAAAAGAGTAACAGTTTTTTGACGTATGATAACAATGATTCATTGCAAGGAGTTTACTCTTTGGATGGTATGTGTCCGGTTGCCGAAAGTTTCTATGATAATATACCTTTTTATGCGAGAAGTTCTTCACGTGGAAGAAAATTAAATGAAGAAGATGCTGGCGTGATCTGTGAATCATTTGAAGGTTATGACTGTCACGAGTTCGGTTATGATGTAGAGATTGGTGGGAATTCTCAAAAACCTTTTCTAAAGAGCTGCTCTACACAAAAAAGTAGTATCCTGCACGAAAAGACTTTGCTCGCAAATGATGAACTTGAACTCCAAACTGATAGCTTTTGGAGCAAGCAAAACCTAGGGGAGGATTTTTGCAGTGGTAGTAAGGATTTATGTACCCGTCCCTATGTAGAAGTTGCAAAAAAATTAAAGGTGTCCGAAGATTCTGTTTTTCTCGTAAAAGCATGGCCTGAAGAAAATTGTCTCCCTCCAGATTCATGGTATTCAGCAACACAAATAGGTTACTCTAGTTCTGCTGATCGGTTATCAAACTCTGAATGGCATCCTGTGTATCAAGAATCCTCATCTCGAGCTACTGCATTGAGTGTTTATCATACCAATGATATTAATGATCTTGGAGGAGCATCTAGATGCTATAAAAGGACTCCTCGTACACCAAATTTTCATGACGAAGAAAATTGGAACATTTTTAGCTACGATCTTGGAGGAGCATCTAGATGCAGTACAAGGATCCAATGTACACATATTATTGATGACGAAGAAAATGGGCACAACTTCAGTTACGATATGTCAAGGAATGCTAACCAGCATCCCTGCACCTCAAGTTTTGCAAATAGTGGATTTAGTTTTGATGGTGCTGTTGATTGTAAAGAAATATTCAACAGATTGGTTGATTGGCCTGATTTCGGTGATGCACATTTCACAAAAAGGTCGGATATTTTAAATGAGGAGCCAGACTGCCTATTACCTGAGTCATGTGTTAGAAACTGCAAGAGACCCAACATTATCAAAGGTGAAAGGGATCGTTTTAGGCATCCAACTTTGGAGAAGACTCGTGTAAGATCTAAAAGAAGCTTCTCAGCTCCTCCATTTCATAGAAGTAGAAGGAGGTTTTTCTCTTTAAACCAGCCTCCCGAAATGGTAGCTAAAAGACCTAGCGGTCTAGCATCCGACCCTGCTTCCAATCTTCTAGAAGTTAGTGATTTTAAATATTCTCAACATCCTCCTGGCGCTCTTAACCCCAACAATGACGATCTATTGGAAGATCTTAAAATTAATGTGAAACGGAGTTCAGAGGTCCTGGGAACTACAAAGGCTAATGACACTGCTGAGATTGATGGGTTTGAAAGTTTCAATGTTAAACAAAATGATCCATTAAGGGAATTGATATCTAGGGAAGTGCAAGATTCCATAGATTATGGGACCAAATGGAGGAACTGCTCACCTCAAACTCCAAAGAAGGATAAAATTGATATTCAAAGTCAAAACAATATACTCGACATCTCATCTGGATTCTTGCATCTTGCTGGAGATTCACTAATACCTGATACCGTCAGTAAGAAATGCCTCGAGGATGCCAAAGTTCTCCATCAGGTGGATAAGAAATTCATTCCAATCGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGGAGACGAAAGAATCAGACTGGAAGACTTGCGTCAAAAGGTATTATCTGGAGAAGCAAAAGCAATAACCTATCTAGATGCTGAACAGGAGCTGGTACTGCCAGAGATTGGTTATCAACTACTTCATAGTTACAGTGAACAGATTAAAGATTGGGGCTGGATCTGTAACATTCATACTCAAAATTCTGATTCCTTTAGAAGGAATTTGGATATTCTCAACAGACAACAAATGACAATCGCACTTGTTGCGGTACCGTGTATTTTAGGTGTCAATTTAAACGATGTTGATCTTTTAGAGTTTCTTCAGCAGCTAGCTGATACTGACGGATCATCAACAATGCCACCTTCTGTTGTGCGACTCCTAAATTCGAAATCGTGCAGAGGTGCAATTATGTTTGGGGACTCATTGCTACCATCAGAATGTTCCCTTCTAGTTGAAGAGCTAAAGCATACATCACTATGTTTCCAGTGTGCTCATGGGAGACCAACCACTGTTCCTCTAGTCAACTTGGAGGCACTGCATAATCAAATAACCAAGCTTGGACTGATGAATAAAAACTCAAGTAATAAGTGGCATGGATTACAAAGACATAAAGTGAGTATTGAACGTGCAGTGCAGCGTTTAAGTTCTGCTAGGGGTTGA 3711 0.4012 MATIRPLPESVRSSIRSAFSIFDFTRIVEELVYNSLDARATKVSVFVDIGSCYLKVVDDGGGITRDGLELVGERYATSKFLNLADLNATSGNFGFRGEALASISEVSLLQIVTRAYGRPNGYRKVLKGCKCIYLGIDDDRKEVGTTVIVCEIFYNQPVRRKHIQSSPNKVLQSIKKCVMRLALVCPNISFKVVDIERPDELFCSHSAASPLSLVTTGFGVEVTNSLHELEVENDIIKLTGYISGPCNTLDMKALQYLYINSQFVCKGPVHKLLNQLAIRFEHRNSWSSDNECQNKKRGRSQPCPAYILNLRCPRSLYVLSFEPSKTYVEFKDWAPILNFIEKVIKQFWEGSIACGDSSNKATYMVQDQREKVDADVNTISAEADISKFGSQNRKDCLDLFFSTSDKLNEDDNHQCYREDVIASVAYLQRGTKILKEKQNKGGFLCQTGYSGNLLDVSYAKSMSTIMKKSNSFLTYDNNDSLQGVYSLDGMCPVAESFYDNIPFYARSSSRGRKLNEEDAGVICESFEGYDCHEFGYDVEIGGNSQKPFLKSCSTQKSSILHEKTLLANDELELQTDSFWSKQNLGEDFCSGSKDLCTRPYVEVAKKLKVSEDSVFLVKAWPEENCLPPDSWYSATQIGYSSSADRLSNSEWHPVYQESSSRATALSVYHTNDINDLGGASRCYKRTPRTPNFHDEENWNIFSYDLGGASRCSTRIQCTHIIDDEENGHNFSYDMSRNANQHPCTSSFANSGFSFDGAVDCKEIFNRLVDWPDFGDAHFTKRSDILNEEPDCLLPESCVRNCKRPNIIKGERDRFRHPTLEKTRVRSKRSFSAPPFHRSRRRFFSLNQPPEMVAKRPSGLASDPASNLLEVSDFKYSQHPPGALNPNNDDLLEDLKINVKRSSEVLGTTKANDTAEIDGFESFNVKQNDPLRELISREVQDSIDYGTKWRNCSPQTPKKDKIDIQSQNNILDISSGFLHLAGDSLIPDTVSKKCLEDAKVLHQVDKKFIPIVAGRTLAVIDQHAGDERIRLEDLRQKVLSGEAKAITYLDAEQELVLPEIGYQLLHSYSEQIKDWGWICNIHTQNSDSFRRNLDILNRQQMTIALVAVPCILGVNLNDVDLLEFLQQLADTDGSSTMPPSVVRLLNSKSCRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQITKLGLMNKNSSNKWHGLQRHKVSIERAVQRLSSARG* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0895 1236 Gene3D - 1002 1190 IPR042120 -
Mal6g0895 1236 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1195 IPR028830 GO:0006298
Mal6g0895 1236 Pfam MutL C terminal dimerisation domain 998 1159 IPR014790 GO:0005524|GO:0006298
Mal6g0895 1236 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 118 - -
Mal6g0895 1236 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Mal6g0895 1236 SMART MutL_C_2 999 1159 IPR014790 GO:0005524|GO:0006298
Mal6g0895 1236 SUPERFAMILY DNA mismatch repair protein MutL 997 1190 IPR037198 -
Mal6g0895 1236 Gene3D - 1043 1154 IPR042121 -
Mal6g0895 1236 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1195 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Mal6g0895 1236 Gene3D - 215 352 IPR014721 -
Mal6g0895 1236 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Mal6g0895 1236 Pfam DNA mismatch repair protein, C-terminal domain 218 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Mal6g0895 1236 SUPERFAMILY Ribosomal protein S5 domain 2-like 219 348 IPR020568 -
Mal6g0895 1236 Gene3D - 2 205 IPR036890 -
Mal6g0895 1236 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22 200 IPR036890 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0895 K08739 - gmx:100788019 1686.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0895 6 13410841 13420917 Mal6g0895 6 13410841 13420917 ECH