Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0846 ATGAATCCTCTTGGCATGATTTTCTGTGGTTCTCCGGTAAATTTGGATCGATCGAAAGTTTCGAGGATTGGTATTCTACCTCGTTATGCTAAAGACGAATCCAAGATGAAATGGTATGATGTTTCAGGGTTTAATATTATGCACGCGATAAACGCGTGGGATGAGGATGATGGGAAAATAGTGACATTGATTGCACCGAATATTCTCTCCGTGGAGCATATGATGGAGAGAATGGAACTTGTTCATCCTATGATTGAGAAAGTGAGGATTAACGTTGAAACGGGGATAATAACAAGACAACCGTTATCGGCAAGGAATCTTGATTTGGCAGTGATCAACAGTGATTTTTTGGGGAAGAGTAATAGGTTTGTTTATGCGGCGATTGGGAATCCAATGCCGAAGATTTCAGGGGTGGTTAAGATTGATGTGTTGAAAGGGGAGGAAGTTGGGTGTAGGATGTATGGAGAGGGTTGTTATGGTGGTGAGCCGTTTTTCGTGGCGAGGGAAGATGGTGAAGAAGAGGATGATGGTTATTTGGTGAGTTATGTGCATGATGAGAATAAGGGAGAGTCGAGGTTTTTGGTGATGGATGCGAAGTCACCGGAGTTGGAGATTGTGGCGGAGGTGAAGTTGCCAAGGAGGGTGCCGTATGGTTTTCATGGATTATTTGTGAAGGAAAGTGACATCATCAAGTTGTTGGTGTTGTAG 708 0.4336 MNPLGMIFCGSPVNLDRSKVSRIGILPRYAKDESKMKWYDVSGFNIMHAINAWDEDDGKIVTLIAPNILSVEHMMERMELVHPMIEKVRINVETGIITRQPLSARNLDLAVINSDFLGKSNRFVYAAIGNPMPKISGVVKIDVLKGEEVGCRMYGEGCYGGEPFFVAREDGEEEDDGYLVSYVHDENKGESRFLVMDAKSPELEIVAEVKLPRRVPYGFHGLFVKESDIIKLLVL* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0846 235 PANTHER BETA-CAROTENE DIOXYGENASE 1 229 IPR004294 GO:0016702
Mal6g0846 235 Pfam Retinal pigment epithelial membrane protein 10 225 IPR004294 GO:0016702
Mal6g0846 235 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0846 Mal-Chr6 12672209 12672916 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0846 K09840 - gmx:100777875 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0846 6 12672209 12672916 Mal6g0846 6 12672209 12672916 ECH