Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0844 ATGGTCCCCAAATCCATCATAATAACAACTAAACCACCACCAACAATTCCTATCCCTCAATTTAACATAGCATCCGTCAGAACCGAAGAAAAGCCTCAAACATCACAACCCGAAATACTTAAAACCACCACCACAACACCCCCCACAAAATCACCTCCTACACCCCCCACCACCACCACCCATAACCTCAAAACCACAAACAAAAAACCACAAACATCATCAATCACAGCACTACTATTCAACACATTCGACGACATCATCAACACCTTCATAGACCCACCAATAAAACCATCCGTAGATCCAAGACATGTTTTGTCCCAAAACTTTGCGCCAGTCCTAAACGAACTCCCTCCAACACAATGTGAAATCATCAAAGGCACACTTCCACCGTCACTTAACGGCGCTTACATTCGAAATGGTCCAAACCCACAGTTCCTTCCACGTGGACCCTACCACCTCTTCGACGGTGACGGTATGCTTCACGCCATTACAATCTCAAACGGAAAAGCCACACTCTGTAGCCGTTATGTTCAAACTTACAAATACAAAATCGAAAACGAAGCTGGTTACCAACTTATTCCAAACGTGTTTTCCGGTTTCAACTCGCTTATCGCTTCAGCCGCACGTGGCTCAGTAACTGCTGCACGTGTCATATCAGGACAATACAATCCTTCTAACGGCATTGGTTTAGCAAACACAAGTTTGGCTCTGTTTGGTAACAAACTCTTCGCTTTAGGAGAATCAGATCTTCCTTATGAAATTAAATTAACACCAAACGGTGACATTCAAACAATTGGCCGTTACAATTTTAACGGCAAACTCTCAATGAGCATGACTGCACATCCAAAAATTGACGGCGACACAGGGGAAACTTTTGCTTTCCGTTACGGTCCTATGCCACCGTTTTTAACCTATTTCCGTTTTGATTCTAATGGTGTTAAACACAACGACGTTCCGGTTTTCTCCATGACAAGACCTTCTTTTCTTCATGATTTCGCCATTACTAAAAAATACGCTGTGTTTACGGATATTCAGCTTGGAATGAATCCTCTTGACATGATTTCCGGTGGTTCTCCGGTTGGTTCCGATCCTTCAAAGGTTTCGAGGATCGGAATTCTTCCTCGTTATGCTAATGATGAGTCGAAGATGAAATGGTTTGATGTGCCAGGGTTTAATATTATGCACGCGATAAACGCGTGGGATGAGGATGATGATGAAGAAACTGTGACACTAATTGCGCCGAATGTTCTCTCCATCGAGCATACGATGGAGAGACTTGAGCTAGTTCATGCAATGGTTGAGAAAGTGAAGATTAACATGAAAACTGGGATTGTATCAAGACAACCATTATCAGCGCGAAACCTGGATTTCGCGGTGATAAATGGTGATTATATGGGAAAGAAGAATAGGTTTGTTTATGCGGCGATTGGGAATCCAATGCCGAAGATTTCAGGGGTGGTTAAGATTGATGTGTTGAAAGGGGAGGAAGTTGGGTGTAGGATGTATGGAGAGGGTTGTTATGGTGGTGAGCCGTTTTTCGTGGCGAGGGAAGATGGTGAAGAAGAGGATGATGGTTATTTGGTGAGTTATGTGCATGATGAGAATAAGGGAGAGTCGAGGTTTTTGGTGATGGATGCAAAGTCACCGGAGTTGGAGGTTGTGGCGGAGGTGAAGTTGCCAAGGAGGGTGCCGTATGGTTTTCATGGATTATTTGTGAAGGAAAGTGACATCATCAAGTTGTCGGTGTTGTAG 1752 0.4372 MVPKSIIITTKPPPTIPIPQFNIASVRTEEKPQTSQPEILKTTTTTPPTKSPPTPPTTTTHNLKTTNKKPQTSSITALLFNTFDDIINTFIDPPIKPSVDPRHVLSQNFAPVLNELPPTQCEIIKGTLPPSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAITISNGKATLCSRYVQTYKYKIENEAGYQLIPNVFSGFNSLIASAARGSVTAARVISGQYNPSNGIGLANTSLALFGNKLFALGESDLPYEIKLTPNGDIQTIGRYNFNGKLSMSMTAHPKIDGDTGETFAFRYGPMPPFLTYFRFDSNGVKHNDVPVFSMTRPSFLHDFAITKKYAVFTDIQLGMNPLDMISGGSPVGSDPSKVSRIGILPRYANDESKMKWFDVPGFNIMHAINAWDEDDDEETVTLIAPNVLSIEHTMERLELVHAMVEKVKINMKTGIVSRQPLSARNLDFAVINGDYMGKKNRFVYAAIGNPMPKISGVVKIDVLKGEEVGCRMYGEGCYGGEPFFVAREDGEEEDDGYLVSYVHDENKGESRFLVMDAKSPELEVVAEVKLPRRVPYGFHGLFVKESDIIKLSVL* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0844 583 Pfam Retinal pigment epithelial membrane protein 109 573 IPR004294 GO:0016702
Mal6g0844 583 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 19 577 - -
Mal6g0844 583 MobiDBLite consensus disorder prediction 28 47 - -
Mal6g0844 583 PANTHER BETA-CAROTENE DIOXYGENASE 19 577 IPR004294 GO:0016702
Mal6g0844 583 MobiDBLite consensus disorder prediction 28 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0844 Mal-Chr6 12642262 12644013 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0844 K09840 - gmx:100777875 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0844 6 12642262 12644013 Mal6g0844 6 12642262 12644013 ECH