Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0789 ATGTTTAAGATGAGGAAAGGACTACCTTGCTGCAGCAGGGGAAGGAAAGTGAGCATTGATTTTCATGACCAAGAGAGAATTATGACATATAATGGCCTTGAGAGTTGCATTCTAAATAACCAATCTTATGAAGAGGAAAGCAGAACAAGTAGAGGAGATGGATGTATAACTGATTCATTTGATGAAGATGATTCAAGTTGTTCTTCAAGCAAAGATGCTTTTGGATCATTCTCTTCAAAATGCTTAACAATGAAAAGAGAGGATGAACAAGGACTTGAAGAATGGGAACTTTCAGAAAGTCCTCAACATTTTTATGTCAAAGAGAAGCCTTCTTATGCTATCCAACATTCAGATGTTGAAGCCATGAAGGAAAAATTTTCTAAGCTCTTACTTGGTGAAGATGTTACTGGAGGAACTAAGGGCATCACTACAGCTTTGGCACTGTCTAATGCCATCACAAACTTATCAGTTACTGTTTTTGGTGAGCTGTGGAAATTGGAACCATTATCTGAAGAAAGAAAGAGCAAATGGCGAAGAGAAATGGATTGGTTACTGTCTCCAACCAACTATATGGTTGAGCTAGTTCCTGCTAAGCAGAACAATGCCAATGGTAGAATCTTTGAGATAATGACACCAAAAGCTCGTGCAGACATTCACATGAATCTTCCAGCACTCCAGAAGTTGGACTCTATGCTTATCGAGGCACTTGATTCAATGGTGAAAACAGAGTTTTGGTATGGAGAGGGAGGAAGCCGGACCGAAGGGAGAGACACGAGTGCACGGCATAGTAAAAGATGGTGGCTTCCATCACCTCAAGTACCAAAAACTGGTCTTTCTGATACCGAAAGAAAGAGGTTGGTTCATCAGGGAAAGGTGGTACGCCAAGTATTCAAGGCTGCCAAATCTATCAATGAAAATGTGTTGCTTGAAATGCCCGTGCCAGTTGTTATTAAAGATGCACTTGCAAAGTCTGGAAAGGCAAGCCTTGGACAAGAACTGCACAAGGTTTTGACCGCTGAATCAAGTTGTGGAGAAGACATGCTTAAATCTCTGAATTTGAAATCTGAACATATGGCCCTTGAAACCATTAATAAATTGGAAGCCGTTATATTCTCATTGAAAGAGAGAACTATGGAACAAGTCACTGGAAAATCACCAGTTCGAACCTCATGGTCATTTGTGAAAGGCCCTATGTCAGAAGTTGATAAAATGGAGTTATTATTGGACCGTGCTGAAACACTTTTACAGCTGCTTAAAATCAGATATCCCAATCTTCCTCAAACATTTCTTGATGCTGCTAAAGTTCAATATGGCAAGGATATTGGACATTCCATTTTGGAAGCTTATTCCAGAGTTCTTGGAAATTTAGCCTTTAGCATATTGTCTAGAATAGGAGATATATTACAAGAGGATTGTCTAAGCAATTCTAATTCACTAAGTTGCTCTCCTGGAATAAATATCTCTGAAACTTGGAGGGTAGATTCACATATTAAGCAATCCTTACTTCAAAAAATGAACAAAGCAGATGGACAATGTTGTGATAGTACTTCAGATTAA 1557 0.3905 MFKMRKGLPCCSRGRKVSIDFHDQERIMTYNGLESCILNNQSYEEESRTSRGDGCITDSFDEDDSSCSSSKDAFGSFSSKCLTMKREDEQGLEEWELSESPQHFYVKEKPSYAIQHSDVEAMKEKFSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQNNANGRIFEIMTPKARADIHMNLPALQKLDSMLIEALDSMVKTEFWYGEGGSRTEGRDTSARHSKRWWLPSPQVPKTGLSDTERKRLVHQGKVVRQVFKAAKSINENVLLEMPVPVVIKDALAKSGKASLGQELHKVLTAESSCGEDMLKSLNLKSEHMALETINKLEAVIFSLKERTMEQVTGKSPVRTSWSFVKGPMSEVDKMELLLDRAETLLQLLKIRYPNLPQTFLDAAKVQYGKDIGHSILEAYSRVLGNLAFSILSRIGDILQEDCLSNSNSLSCSPGINISETWRVDSHIKQSLLQKMNKADGQCCDSTSD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0789 518 ProSiteProfiles PRONE domain profile. 109 481 IPR005512 GO:0005085
Mal6g0789 518 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 117 475 IPR005512 GO:0005085
Mal6g0789 518 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 20 515 - -
Mal6g0789 518 Coils Coil 401 421 - -
Mal6g0789 518 Gene3D PRONE domain, subdomain 1 349 481 - -
Mal6g0789 518 Gene3D PRONE domain, subdomain 1 111 348 - -
Mal6g0789 518 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 515 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0789 Mal-Chr6 11595412 11602076 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0789 - - gmx:100818685 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0789 6 11595412 11602076 Mal6g0789 6 11595412 11602076 ECH