Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0712 ATGTCTGGTTCAAATTCACCGCGTGGTGAACAAGAACAACAAGAGAATCAAATGAATTCATCTTCACCGCGTGGTGAAGAAGAACAACAAGAGAATCAAATGAATTCATCTTCATCGCGTGGTGAACAAGAACAACAAGAGAGTCAAATGGATTCATCTTCACCGCGTGGTGAACAAGAACAACAAGAGAATCAAATGAATTCATCTTCACCGCGTGGTGAACAAGAACAACAAGAGAATCAAATGAATTCATCTTCAACGGTGAGTTCAATTTCCGAAGATCTAGATCCTGCTCAATTGGGTATTTCTTTGCCTGATCTTGATCTTGACGTTGACGTTGACGTTGAGGTTGAGTTCACCGACGAAGAGCTTATGTCGTATATTTGGCCGGAGGTGTTGGATGCTGGTGAGTATGGTCCGATTAATTCGTCGCGGATTATGGCTGTGCAGCCGGAAGGATGGATACCGCCGGCTTATGCTCCTGATGATGACAACTGGTACTATGATGATCTTGATGAGGCAGCCTTAAAGGATTTAGTTAAAGATTCTGATCCTAAAGTTGCGCCATCAATCATTGGAGCTGGGCTTGCCAACCTTGGCAACACATGCTTTCTCAATTCAATTATGCAATGCTTCACGCATACAGTGCCCCTCGTTGAGGGTATTTTTTTGTGCCGCCATTCTCCTACTGATGGTCATAATGGATTCTGTGTTATTTGTGCTTTCCGCTACCAGATGCAACAGTCCTTTCAGTCTACTGGAAGAGTTATCTCCCCTGTGGTACTTGTGGATAATTTGAAGCATTTTTCTTCTATGTTTAGAAGACATCAGCAAGAGGATGCACATGAATTTATGCAGTGTGCATTGGATAAACTTGATTCATGTTTTTTGTATATGAAGAAGAATGATCCAAATCTTGAGGAGGATAGTATTGTGAAGAAAATATTTGGAGGTAGTCTGGTTAGCAAGCTTCGGTGTTGTAACTGTGGTCGCTCTTCTGATACTAATGAGCCATCGATTGACCTGAGTCTAGAAATAGAAAATGTAGATACTATTTCAAGTGCTTTAGAGTCTTTTACTATGGTGGAAAACATTGATGCTAAGTTTAAATGTGAGGGCTGCAATGAGGAAGTGTCTCTGGAGAAACAGCTTATGTTGGATCAGACACCTTCTATTGCTGCATTCCATTTAAAGAGGTTTAAGACAGATGGAATTTCAGTTGAAAAGATTGACAAGCATATCAATTTCCCATTGGAGTTGGATTTGCAACCTTACACCATTAATGAAAACAATAATGCATCATTGAAATATGATCTATATGCAGTTGTTGTGCATACTGGAGTTTCATCTACCTCGGGGCATTATTTCTGCTTTGTTCGCACTGCTCCAGACACATGGCATAAGTTGGATGATTCAATGGTTACTAAGGTATCTGAAGAGACTGTGCTGTCTCAGGAAGCATACATACTTTTTTATGCCCGACAAGGCACACCTTGGTTTTCAAATTTTGTGGAATCTACTACGTGCTTGGATCTGAGTAGGATGAATACGTCTCCCAAGTCTGTTTTAGACGTCACTGATGCTGATGGCCAGGATAAATCCTTTTCTATTTTAAATGAAAACATTGGAAGGAGTGGGGCTGGTAAATCCAAAGAATTTTCTGAGAAGTCTGATTATTCTTGTCGACAAAGTCACAAGTTTCTTGAGAATGATGATGTTATTGATGCTTCTCCTTGCCGCGAACAATTTCCTGTTGGGCCATCAAATCAGAAAACTCTTCATTTGAATGGATTGGAAGATATAAACGCCGAAGTGCTACCTGTGAATTGTGCCAGCTCAACTGGTATTGCAAAGCCTGGTGGGAGTTCATATGCTGAGAATGTTGCTCCTAATAAAAACAAATGCAGTCTGGAAGTTAATGGTTTTACAGAGAATGATGGATTTAATCCTTTAACTCCTCCCAACTCCCCCCCTTCTCAGACTCCAGGTAAGAGTTTCCAGATCTCACGTGATCATTTGAAGACAGAGAAGCAAGGGAGTAGTGGTAAAAGATCATCATCATCAAATAAGTTAACAGACGACGATCCTCAAAATAAAGCTGCCATTGCATATGTTAAGAATATGCATGGTTCAAGGAGAGGTGCATTTTTGGACTTACTTGGTGCTTCCCCAGAAAACAAGAGAAAAAAGACTGATTCATCGCAGTCTGACAAAGACAGCGACAGTGCTCGCAAGAAATCAAGCCATGCTTCCGTCGGCAGCTACCCTGTGGCAGCCGGAACTTCACAGTGA 2292 0.4123 MSGSNSPRGEQEQQENQMNSSSPRGEEEQQENQMNSSSSRGEQEQQESQMDSSSPRGEQEQQENQMNSSSPRGEQEQQENQMNSSSTVSSISEDLDPAQLGISLPDLDLDVDVDVEVEFTDEELMSYIWPEVLDAGEYGPINSSRIMAVQPEGWIPPAYAPDDDNWYYDDLDEAALKDLVKDSDPKVAPSIIGAGLANLGNTCFLNSIMQCFTHTVPLVEGIFLCRHSPTDGHNGFCVICAFRYQMQQSFQSTGRVISPVVLVDNLKHFSSMFRRHQQEDAHEFMQCALDKLDSCFLYMKKNDPNLEEDSIVKKIFGGSLVSKLRCCNCGRSSDTNEPSIDLSLEIENVDTISSALESFTMVENIDAKFKCEGCNEEVSLEKQLMLDQTPSIAAFHLKRFKTDGISVEKIDKHINFPLELDLQPYTINENNNASLKYDLYAVVVHTGVSSTSGHYFCFVRTAPDTWHKLDDSMVTKVSEETVLSQEAYILFYARQGTPWFSNFVESTTCLDLSRMNTSPKSVLDVTDADGQDKSFSILNENIGRSGAGKSKEFSEKSDYSCRQSHKFLENDDVIDASPCREQFPVGPSNQKTLHLNGLEDINAEVLPVNCASSTGIAKPGGSSYAENVAPNKNKCSLEVNGFTENDGFNPLTPPNSPPSQTPGKSFQISRDHLKTEKQGSSGKRSSSSNKLTDDDPQNKAAIAYVKNMHGSRRGAFLDLLGASPENKRKKTDSSQSDKDSDSARKKSSHASVGSYPVAAGTSQ* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0712 763 MobiDBLite consensus disorder prediction 715 763 - -
Mal6g0712 763 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 189 518 - -
Mal6g0712 763 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 437 455 IPR018200 GO:0004843|GO:0006511
Mal6g0712 763 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 195 210 IPR018200 GO:0004843|GO:0006511
Mal6g0712 763 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 194 495 IPR028889 -
Mal6g0712 763 MobiDBLite consensus disorder prediction 1 92 - -
Mal6g0712 763 MobiDBLite consensus disorder prediction 723 746 - -
Mal6g0712 763 MobiDBLite consensus disorder prediction 641 697 - -
Mal6g0712 763 SUPERFAMILY Cysteine proteinases 192 494 IPR038765 -
Mal6g0712 763 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 189 518 - -
Mal6g0712 763 Pfam Ubiquitin carboxyl-terminal hydrolase 195 492 IPR001394 GO:0004843|GO:0016579
Mal6g0712 763 MobiDBLite consensus disorder prediction 680 695 - -
Mal6g0712 763 Gene3D Cysteine proteinases 192 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0712 Mal-Chr6 10323923 10328336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0712 184 494 Miscellaneous Gene Families AT4G31670 35.312 9.18e-52 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0712 K11855 - gmx:100806936 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0712 6 10323923 10328336 Mal6g0712 6 10323923 10328336 ECH