Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0687 ATGGCGGCGAAATGCTTACTCCGCCGCACCAGACTTTACTTCCACCAACCCCATTTCCTCAGGTTCTATTCTCCATCTTCTTCAGCATTCATGTTAGAACCCCAATACGAAACTCCCAATTTCAACACCCCACTTTTCAAAACCACACCAAAACTCTCTCGTATGGTTGTTAAAGTCATAAAGATTTTAAATTGGGGTGTTGCAAGGGAAATCACGTTCAAGGGTTGGGTTCAAATTCATGGTTTTGAAAAATCAATCAATTCCTTTAGCATCATCATTCACACATATGCTTCAGCTGGTATGTCTTGGGAAGTTTTCATTTTGCTTAGAGATATTGTTACGTATTATAAGGAAGAGAATCGCGACGACGCAGATAAATTGGTTTCGGTTCTGCTTGATGATGGAAGGTCTGCTGTGGTGTTTGATATGCTTATCAAAGTTTTTGCTTCGAATTCTATGCTTGAACATGCTTATCATGTTTTTGTTATTGCTACCAATGTTGGGATTGAGCCGAATATAAGGTGTTGTAATTTCTTGTTGAAGTGTCTGGTTGAAGATAATAGAGTGGATGGTGTGAGATTATTGTTTGACGATTTGATAAATGTTGGTCCGAGGCCGAATATTCACACTTATACAATCATGATGAATTTTTATTGTAGAGATGTTGGGTGTAGTGTTGATGATATTAGACGGGCATCTGAGATTTTAGGGAAGATTTATAGGAGTGGGGAAACCCCGAATGTTGTCACGTTTAGTACTTATGTTAAGGGACTTTGTAAAGTTGGTTACCTTGAGGTTGCGTGGAAGTTAATTCAAAACTTGTGCTGTAAAAACCAGACTCTCAATAGCCACTGTTTTAATGCTGTCATATATGGATTGTGTCAAAGAGGTATAGTAGATGAAGCTTTAGGAGTTTTAAAAAAAATGAAGATCACTGGAATATTGCCTGATGTTCATAGTTATAGCATTTTAATTGGTGGATTTTGCAGGAAAGGTGATATGGATTCAGTCACAAAGCTTTGGGAGGAGATGACTAGCAATAATTTTGCTCCTTCTGCTTTTAGTTTTTGCAGTTTGATTAAGGTGTTCTACAAATCGAGAAAATTCACTAAAGCATTGGAAGTTTTTAGGATCATGGAAAACCATGATATGTGGCCAGATACAATGGCTTGCAATCATATTCTTAGTATTTACTGCAGGAAGCGCGACTTCAATGAAGCCTTGGCATTGTTGGAGAAATTCCAAGAACATAGAGTTTTCCTCAACCCACATTCATATAATGAACTCATCCACAAGCTTTGCAGAGAAAGTGTTCCAGAAAAGGCACTGCTGCTTTTGCCAGTAATGCTGAAAAGGAATGTACTTCCCGGAGTTGTTAATTATAGTACTCTTATATCTTGCTTTGCCAAACAGTCAAATTCTGAAAAGGCTGTGATGTTATTCAAGAGAATGACGAAAGTAGGAATCACTTTCAACGTCAAAACGTATACAATTCTTATTAACCTATACATCCGTAATTGCAAAATGTGTACGGCACGTGACTTATTTGAGAAAATGAAAGAAAGGGACGTAGATCCAGATCAGATCGCGTATACAACTCTAATTGCTGGTTATTGTAATACTAGAGAAATGGATAAGGCACTGACATTATTTGATGAAATGTCGCAGAAAGGCTGTTCACCAAATGTAGTTACATATACTTGTTTCGTTAATACATATTTGAAGTTAAACATGAGAGATCAGGCTCTTAAGTGGTATGAGGAAATGAAAGAAAAGGATGTATATCCAGATCGGATCATGTATACAATGCTAATTGCTGCCTTTTGTAATAATGGAGAAATGTATAGGGCGCAGGTGTTATTTGAGAAAATGAAAGACAGGGATGTATATCTAGATCAGATCGTGTATACAACTCTAATTGCTGGTTATTGTAATACTAGAGAAATGGATAAGGCACTGACATTATTTGATGAAATGTCGCAGAAAGGCTGTTCACCAAATGTAGTTACATATACTTGTTTCGTTAATACATATTTGAATTTAAACATGAGAGATCAGGCTCTTAAGTGGTATGAGGAAATGAAAGAAAAAGATGTATATCCAGATCGGATCATGTATACAATGCTAATTGCTGCCTTTTGTAATAATGGAGAAATGTATAGGGCGCAGGGGTTATTTGATGAAATGTCGCGGCGGGAAGGCTGTTCACCAAATGTAGTTACTTATACTTGTTTGATTAATGCATATAGTAAGTTAAACAAAAGGGATCAGGCTCGGAAGTTGTATGTGGAAATGAGGGCAAAGGGTTTGTCCAGATTATGTAGCTCATAA 2331 0.3707 MAAKCLLRRTRLYFHQPHFLRFYSPSSSAFMLEPQYETPNFNTPLFKTTPKLSRMVVKVIKILNWGVAREITFKGWVQIHGFEKSINSFSIIIHTYASAGMSWEVFILLRDIVTYYKEENRDDADKLVSVLLDDGRSAVVFDMLIKVFASNSMLEHAYHVFVIATNVGIEPNIRCCNFLLKCLVEDNRVDGVRLLFDDLINVGPRPNIHTYTIMMNFYCRDVGCSVDDIRRASEILGKIYRSGETPNVVTFSTYVKGLCKVGYLEVAWKLIQNLCCKNQTLNSHCFNAVIYGLCQRGIVDEALGVLKKMKITGILPDVHSYSILIGGFCRKGDMDSVTKLWEEMTSNNFAPSAFSFCSLIKVFYKSRKFTKALEVFRIMENHDMWPDTMACNHILSIYCRKRDFNEALALLEKFQEHRVFLNPHSYNELIHKLCRESVPEKALLLLPVMLKRNVLPGVVNYSTLISCFAKQSNSEKAVMLFKRMTKVGITFNVKTYTILINLYIRNCKMCTARDLFEKMKERDVDPDQIAYTTLIAGYCNTREMDKALTLFDEMSQKGCSPNVVTYTCFVNTYLKLNMRDQALKWYEEMKEKDVYPDRIMYTMLIAAFCNNGEMYRAQVLFEKMKDRDVYLDQIVYTTLIAGYCNTREMDKALTLFDEMSQKGCSPNVVTYTCFVNTYLNLNMRDQALKWYEEMKEKDVYPDRIMYTMLIAAFCNNGEMYRAQGLFDEMSRREGCSPNVVTYTCLINAYSKLNKRDQARKLYVEMRAKGLSRLCSS* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 527 561 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 285 318 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 599 632 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 634 668 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 461 492 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 530 563 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 319 352 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 564 597 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 390 422 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 740 771 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 704 739 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 669 702 IPR002885 -
Mal6g0687 776 TIGRFAM PPR: pentatricopeptide repeat domain 495 527 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 632 666 IPR002885 -
Mal6g0687 776 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 322 612 - -
Mal6g0687 776 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 600 710 - -
Mal6g0687 776 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 692 770 - -
Mal6g0687 776 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 5 333 - -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 422 456 IPR002885 -
Mal6g0687 776 Gene3D Tetratricopeptide repeat domain 437 545 IPR011990 GO:0005515
Mal6g0687 776 Gene3D Tetratricopeptide repeat domain 223 346 IPR011990 GO:0005515
Mal6g0687 776 Gene3D Tetratricopeptide repeat domain 71 222 IPR011990 GO:0005515
Mal6g0687 776 Gene3D Tetratricopeptide repeat domain 647 775 IPR011990 GO:0005515
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 457 491 IPR002885 -
Mal6g0687 776 PANTHER (PPR) REPEAT PROTEIN, PUTATIVE-RELATED 600 710 - -
Mal6g0687 776 PANTHER (PPR) REPEAT PROTEIN, PUTATIVE-RELATED 692 770 - -
Mal6g0687 776 PANTHER (PPR) REPEAT PROTEIN, PUTATIVE-RELATED 322 612 - -
Mal6g0687 776 PANTHER (PPR) REPEAT PROTEIN, PUTATIVE-RELATED 5 333 - -
Mal6g0687 776 Gene3D Tetratricopeptide repeat domain 546 646 IPR011990 GO:0005515
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 351 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 702 737 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 738 772 IPR002885 -
Mal6g0687 776 SUPERFAMILY HCP-like 468 699 - -
Mal6g0687 776 Pfam PPR repeat family 456 501 IPR002885 -
Mal6g0687 776 Pfam PPR repeat family 632 678 IPR002885 -
Mal6g0687 776 Pfam PPR repeat family 526 573 IPR002885 -
Mal6g0687 776 Pfam PPR repeat family 701 751 IPR002885 -
Mal6g0687 776 Pfam PPR repeat family 171 220 IPR002885 -
Mal6g0687 776 Pfam PPR repeat family 282 330 IPR002885 -
Mal6g0687 776 Pfam PPR repeat family 386 435 IPR002885 -
Mal6g0687 776 Gene3D Tetratricopeptide repeat domain 347 420 IPR011990 GO:0005515
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 562 596 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 597 631 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 667 701 IPR002885 -
Mal6g0687 776 Pfam PPR repeat 244 270 IPR002885 -
Mal6g0687 776 Pfam PPR repeat 593 625 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 352 386 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 387 421 IPR002885 -
Mal6g0687 776 Pfam PPR repeat 354 382 IPR002885 -
Mal6g0687 776 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 492 526 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0687 282 771 Glycosyltransferase AT1G05670 29.592 7.35e-63 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0687 - - mtr:MTR_5g029690 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0687 6 9734026 9736470 Mal6g0687 6 9734026 9736470 ECH