Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0681 ATGTCGATAAAAACTGTTCAAGTCAGCAACGTTTCCTTGGGAGCAACCGAGCGGGACATTCAAGAGTTCTTTTCTTTTTCTGGTGACATTGCATATGTTGAACTACGGAGCCGTGATGAACGATCTCAAATTGCTTTTGTTACCTTCAAGGATTCACAGGGAGCTGAGACTGCAGTATTGCTATCGGGAGCAACAATAGTCGACCTGTCAGTTACAATAACTCTGGATCCAGATTACCAGCTTCCACCTGATGCCTTGGTTTCATCTGTAAATGAAAGTCAAACTCCTGGTGGTGCTGACTCTGCTTTGCGGAAGGCAGAGGATGTAGTCTCCAGTATGGTAGCCAAAGGCTTCATCTTAGGGAAAGATGCTGTCAACAAAGCAAAGACTTTTGATGAGAAGCTCCAGTTATCATCGACAGCCTCAGCAACAGTTGCATCTTTTGACCAAAAACTCGGGCTTAGTGAGAAAATAGGTGCTGGTGCTTCAGTCGTGAGTGATAAAGTTCGAGAAGTGGATCAAAAGTTTCTGGTTTCAGAAAAGACAAAATCAGCATTTGCAGCTGCAGAACAGACAGTCAGTACTGCTGGTTCTGCCATAATGAAGAATCGCTATGTACTTACTGGGGCCTCTTGGGTAACAGGTGCTTTTAACAGGGTTTCTAAGGCAGCTGTGGAAGTAGGTCAGAAAACAAAAGAGAAAATGGAGAATGCAGAACAGCAAGAGAAGCGACAGGTTGAAGATCAGTATGCACAGGGCCTTTCTGAACCCCCAAAAGCAGCAGCAGCAAGTGAGCAGCAGTCTTCTAAGCCTGGTCCTGCTCCTGCTCAGGGTTTGATCCTTTGA 846 0.4539 MSIKTVQVSNVSLGATERDIQEFFSFSGDIAYVELRSRDERSQIAFVTFKDSQGAETAVLLSGATIVDLSVTITLDPDYQLPPDALVSSVNESQTPGGADSALRKAEDVVSSMVAKGFILGKDAVNKAKTFDEKLQLSSTASATVASFDQKLGLSEKIGAGASVVSDKVREVDQKFLVSEKTKSAFAAAEQTVSTAGSAIMKNRYVLTGASWVTGAFNRVSKAAVEVGQKTKEKMENAEQQEKRQVEDQYAQGLSEPPKAAAASEQQSSKPGPAPAQGLIL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0681 281 Coils Coil 232 252 - -
Mal6g0681 281 PANTHER BINDING PARTNER OF ACD11 1 1 263 - -
Mal6g0681 281 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Mal6g0681 281 MobiDBLite consensus disorder prediction 232 246 - -
Mal6g0681 281 Gene3D - 2 74 IPR012677 -
Mal6g0681 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Mal6g0681 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Mal6g0681 281 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 263 - -
Mal6g0681 281 MobiDBLite consensus disorder prediction 232 281 - -
Mal6g0681 281 SMART rrm1_1 5 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0681 Mal-Chr6 9683157 9686791 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0681 - - mtr:MTR_5g029640 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0681 6 9683157 9686791 Mal6g0681 6 9683157 9686791 ECH