Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0656 ATGGGAGGTGATTACCCATCCAAGCCAATGTCATTGTATGCTACCATATGGGATGCATCAAATTGGGCTACATCGGGTGGAAAATATAAAGTGAATTATAAATATGCTCCTTTTGTTGTTGAATTTAAAGATTTAGTCCTCAAAGGTTGCTCAATTGATGCAATTCAAGAAGTAATCGACAATGAGGTTTGCTCGGACCAAAACATTCATCTTGAAGCTCAAGACTATGCCGTAGTAAGCCCCATGCGTCGCCTTGCAATGCGAAGATTCCGTCAACGCTTCATGTACTACTCTTATTGTTATGATACAATTAGATACCCTGTGCCACCACCAGAGTGTAACATTATTCTAGCGGAGAAACAAAGGTTTAAGGAGACGGGAAGGTTGAAATTTGGCGGGAGCCACCGCCGGAGTTCTAGACGGGGAGGTCGTACTTCAACTCCGGTTGATGACACTGATCAAAGTGATATGTGA 474 0.4283 MGGDYPSKPMSLYATIWDASNWATSGGKYKVNYKYAPFVVEFKDLVLKGCSIDAIQEVIDNEVCSDQNIHLEAQDYAVVSPMRRLAMRRFRQRFMYYSYCYDTIRYPVPPPECNIILAEKQRFKETGRLKFGGSHRRSSRRGGRTSTPVDDTDQSDM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0656 157 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 78 113 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mal6g0656 157 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3 136 - -
Mal6g0656 157 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 3 136 IPR044791 GO:0004553
Mal6g0656 157 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 114 IPR013320 -
Mal6g0656 157 Pfam Glycosyl hydrolases family 16 3 34 IPR000757 GO:0004553|GO:0005975
Mal6g0656 157 Gene3D - 1 113 - -
Mal6g0656 157 MobiDBLite consensus disorder prediction 129 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0656 Mal-Chr6 9018052 9018525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0656 1 134 Glycoside Hydrolase AT1G32170 70.896 7.19e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0656 K08235 - gmx:100786236 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0656 6 9018052 9018525 Mal6g0656 6 9018052 9018525 ECH