Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0574 ATGGGTAAAGGTAATCATCCACAGAAATCAGGGACCGGCGACGACCTTCATGCGGCGGCAAGATCCGGTGATCTGATAGCAGTTCAGTCAATTTTGATTTCAAATCCTTTGTCCGTTAATTCTAGAGATAAGCATTCCAGAACACCCCTACATTTAGCAGCATTTTCTGGGCAAACAGAGGTAGTCAGTTACCTCTGCAAGAACAAGGCTGATGTTGGTGCTTCTGCTATGGATGATATGGCTGCAATACACTTCGCTGCACAGAAGGGACATTTAGAAGTTGTTCGGGCTCTGGTTTCAGCTGGTGCCTCTTTCAAAGCCTCTACTCGGAAAGGCATGACTCCATTACACTTTGCTGTTCAAGGTTCCCATCTGGAACTTGTCAAGTACTTGGCCAAGAAAGGGTCAAGTCTCACTATCAAGACAAAGGCAGGAAAGACCCCATTAGATCTTGCTACCAATGATGAAGTCCGCACCGTTCTGGAGGGATTTGAAAAGTCAGCTAAGAATGGAGAGTCAAAGAACGAAGATAAAGCTGAAGGTTCTGATCCAAAAGAAAATGAAGAATCTGATCCAAAGGCAACATCGTCTTTAGGATCCGAAGGTAATTTGAGTAGTGAGCCTCCTGTAGCTGCTATTGATGAAGAAAGCGGTGAGAAAGAGAAGAGGAAGGGCAATGAAGATGATGCAAAGGAAAACTCATCACAACCAAAAAAGGCGAGAGTTCAGTTAAGCCATCTCCAAAGTTCAGATGATGTCCAAGAAGAAGAAACCCTGTAG 780 0.4449 MGKGNHPQKSGTGDDLHAAARSGDLIAVQSILISNPLSVNSRDKHSRTPLHLAAFSGQTEVVSYLCKNKADVGASAMDDMAAIHFAAQKGHLEVVRALVSAGASFKASTRKGMTPLHFAVQGSHLELVKYLAKKGSSLTIKTKAGKTPLDLATNDEVRTVLEGFEKSAKNGESKNEDKAEGSDPKENEESDPKATSSLGSEGNLSSEPPVAAIDEESGEKEKRKGNEDDAKENSSQPKKARVQLSHLQSSDDVQEEETL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0574 259 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Mal6g0574 259 Gene3D - 10 184 IPR036770 -
Mal6g0574 259 PANTHER ANKYRIN REPEAT PROTEIN 8 257 - -
Mal6g0574 259 ProSiteProfiles Ankyrin repeat region circular profile. 45 72 - -
Mal6g0574 259 Pfam Ankyrin repeats (3 copies) 16 74 IPR002110 GO:0005515
Mal6g0574 259 Pfam Ankyrin repeats (3 copies) 83 160 IPR002110 GO:0005515
Mal6g0574 259 MobiDBLite consensus disorder prediction 213 236 - -
Mal6g0574 259 MobiDBLite consensus disorder prediction 165 192 - -
Mal6g0574 259 PANTHER - 8 257 - -
Mal6g0574 259 SUPERFAMILY Ankyrin repeat 16 155 IPR036770 -
Mal6g0574 259 ProSiteProfiles Ankyrin repeat profile. 111 143 IPR002110 GO:0005515
Mal6g0574 259 MobiDBLite consensus disorder prediction 165 259 - -
Mal6g0574 259 ProSiteProfiles Ankyrin repeat profile. 45 77 IPR002110 GO:0005515
Mal6g0574 259 ProSiteProfiles Ankyrin repeat region circular profile. 78 104 - -
Mal6g0574 259 SMART ANK_2a 45 74 IPR002110 GO:0005515
Mal6g0574 259 SMART ANK_2a 78 107 IPR002110 GO:0005515
Mal6g0574 259 SMART ANK_2a 111 140 IPR002110 GO:0005515
Mal6g0574 259 ProSiteProfiles Ankyrin repeat region circular profile. 111 143 - -
Mal6g0574 259 PRINTS Ankyrin repeat signature 46 61 IPR002110 GO:0005515
Mal6g0574 259 PRINTS Ankyrin repeat signature 94 108 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0574 14 179 Miscellaneous Gene Families AT1G05640 34.302 1.02e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0574 - - mtr:MTR_5g026800 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0574 6 7586291 7587973 Mal6g0574 6 7586291 7587973 ECH