Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0558 ATGGAGAACTACGAAGTTCTAGAGGAGCTTCACAACGTCGAGGCCGAGATAGAAGATGTTCAAGAACAAATTAGGGCGTTAATTGAAAAGCAAGAGAGGTTGTATGAGAGAAAATCTGAGCTGAATTCGATTCTGGAAGCGTGTAAAGAATCTGAAAATCAGGTTAATAATGGTGCAAGTTCAAGTGCTGTGGAGAATTGGAATGGGACATTTGAATGGGATTCTCAAGCTGATGATCTTAGATTGAATATTTTTGGTATTTCATCTTATCGTGCAAATCAAAAAGAGATAATTAATGCCATATTGAGTGGAAGAGATGTTCTGGTGATTATGGCTGCAGGTGGTGGCAAGAGTCTCTGCTACCAGCTTCCTGCTGTTCTTCGCAATGGAATCGCCCTAGTTGTCAGTCCTTTGCTTTCGCTAATTCAAGATCAGGTAATGGGTTTGACTGCTTTGGGAATCCCAGCATATATGTTAACTTCAACAACAAGTAAGGACAATGAGAAGTTCATATACAACGCTTTGGAGAAGGGTGAGGGGGAACTCAAAATATTGTATGTTACTCCAGAAAAGATATCAAAAAGCAAGAGATTTATGTCAAAACTTGAAAAGTGCCATCATGCTGGTCGTCTCTCTCTAATTTCAATTGATGAGGCACATTGCTGTAGTCAGTGGGGTCATGACTTTCGACCTGATTACAAGAACCTTGGTATTCTCAAGACTCAGTTCCCTAATGTTCCAATGGTTGCTTTGACGGCAACTGCTACTCAAAGGGTCCAAAATGATCTTGTAGAGATGTTGCACATTCGTAGATGTGTCAAATTTGTCAGCACAGTCAATAGGCCAAATTTATTTTATATGGTAAAGGAAAAGTCATCCGTCAGTAAGGTGGTCGTTGACGAAATTGCTGAATTCATTCAAAAATCTTATCCAAATCACGAATCAGGGATTGTTTATTGCTTCTCTAGGAAGGAATGTGAACAGGTTGCAAAGGAGCTAAGGGAGAGAGGAATTTCAGCTGGTCATTATCATGCAGATATGGATGTAAACGATCGTGAAAAAGTACATATGCGGTGGAGCAATAACAAGCTTCAGGTCATAGTTGGTACGGTAGCTTTTGGTATGGGAATCAACAAACCAGATGGTTTGTCATCCATCACAGCTTGA 1167 0.4019 MENYEVLEELHNVEAEIEDVQEQIRALIEKQERLYERKSELNSILEACKESENQVNNGASSSAVENWNGTFEWDSQADDLRLNIFGISSYRANQKEIINAILSGRDVLVIMAAGGGKSLCYQLPAVLRNGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKFIYNALEKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPMVALTATATQRVQNDLVEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVVVDEIAEFIQKSYPNHESGIVYCFSRKECEQVAKELRERGISAGHYHADMDVNDREKVHMRWSNNKLQVIVGTVAFGMGINKPDGLSSITA* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0558 388 SMART ultradead3 86 289 IPR014001 -
Mal6g0558 388 Coils Coil 3 37 - -
Mal6g0558 388 Pfam DEAD/DEAH box helicase 92 260 IPR011545 GO:0003676|GO:0005524
Mal6g0558 388 SMART helicmild6 327 382 IPR001650 -
Mal6g0558 388 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 98 273 IPR014001 -
Mal6g0558 388 Gene3D - 46 280 IPR027417 -
Mal6g0558 388 PANTHER ATP-DEPENDENT DNA HELICASE Q1 8 381 - -
Mal6g0558 388 Pfam Helicase conserved C-terminal domain 303 380 IPR001650 -
Mal6g0558 388 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 298 388 IPR001650 -
Mal6g0558 388 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 83 381 IPR004589 GO:0004386|GO:0006310
Mal6g0558 388 PANTHER DNA HELICASE RECQ FAMILY MEMBER 8 381 - -
Mal6g0558 388 CDD DEXHc_RecQ1 72 280 - -
Mal6g0558 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 381 IPR027417 -
Mal6g0558 388 Gene3D - 281 384 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0558 Mal-Chr6 7405026 7411549 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0558 K10899 - gmx:100817635 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0558 6 7405026 7411549 Mal6g0558 6 7405026 7411549 ECH