Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0275 ATGGCTTCGCGCGTCACCATCACTAATGGCACCTCTTCTTATTTAAACTCTTCACGTTTTCTATCACCTTCTAATATTTCTTCATTCCAAACCCAAAACGGTAATTCTAATTCTAGTTCTATCAACATGAGCAACAAAACCGTTCTCGTTACCGGTGGTGCCGGTTACATCGGTAGCCACACCGTTCTTCAGCTTTTACTCGGTGGTTTCAAAACTGTTATCGTTGATAACCTTGATAATTCATCTGAAGTTGCTGTTCATAGAGTTAAGGAACTCGCTGCTGAATTCGGGAATAACCTCAACTTTCATAAGGTAGACCTCCGAGACAAGGCTGCACTTGAGCAAATTTTTTCTTCCACCAAGTTTGATGCAGTTATACATTTTGCTGGAATGAAAGCAGTGGGTGAAAGTGTGCAGAAACCATTACTTTACTACAACAATAACTTGATTGGGACAATCACTCTATTGGAAGTCATGGCTGCTTATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACTGTATATGGTTGGCCAAAGGAGGTTCCATGTACAGAAGAGTTTCCTCTGTCAGCAGCGAACCCATATGGACGAACCAAGCTTACCATTGAAGAAATCTGCCGTGATGTCAATCGTGCTGATCCAGATTGGAAAATAATGTTATTGAGATACTTCAACCCAGTGGGTGCACACCCTAGTGGTTATATCGGGGAGGATCCTCGAGGGATTCCAAATAATCTTATGCCATTTATTCAGCAAGTAGCGGTTGGCAGACGTCCTGCACTGACAGTTTTTGGAAATGATTATAATACAGTTGATGGCACTGGGGTTCGGGATTACATTCATGTTATTGATTTAGCTGATGGGCATATTGCTGCATTGCATAAACTAGAAGAAGCTGACATAGGTTGTGACGTTTATAACTTGGGGACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAGAGCTTTTGAGCAGGCATCTGGAAAGAAAATTCCCCTTGTGAAAGCTGGCCGTAGACCTGGTGATGCTGAAATTGTTTATGCATCAACAAAAAAAGCTGAAAGAGAACTCAAGTGGAAGGCGAAATATGGAATTGATGAAATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTACGGCTATGGATCTCCGGATTCCACGGATTAA 1176 0.4226 MASRVTITNGTSSYLNSSRFLSPSNISSFQTQNGNSNSSSINMSNKTVLVTGGAGYIGSHTVLQLLLGGFKTVIVDNLDNSSEVAVHRVKELAAEFGNNLNFHKVDLRDKAALEQIFSSTKFDAVIHFAGMKAVGESVQKPLLYYNNNLIGTITLLEVMAAYGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLTIEEICRDVNRADPDWKIMLLRYFNPVGAHPSGYIGEDPRGIPNNLMPFIQQVAVGRRPALTVFGNDYNTVDGTGVRDYIHVIDLADGHIAALHKLEEADIGCDVYNLGTGKGTSVLEMVRAFEQASGKKIPLVKAGRRPGDAEIVYASTKKAERELKWKAKYGIDEMCRDQWNWASKNPYGYGSPDSTD* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0275 391 PANTHER UDP-GLUCOSE 4-EPIMERASE 43 388 - -
Mal6g0275 391 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 43 388 - -
Mal6g0275 391 TIGRFAM galE: UDP-glucose 4-epimerase GalE 48 382 IPR005886 GO:0003978|GO:0006012
Mal6g0275 391 Pfam GDP-mannose 4,6 dehydratase 49 372 IPR016040 -
Mal6g0275 391 CDD UDP_G4E_1_SDR_e 47 376 IPR005886 GO:0003978|GO:0006012
Mal6g0275 391 Gene3D - 48 317 - -
Mal6g0275 391 Gene3D - 236 377 - -
Mal6g0275 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 383 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0275 Mal-Chr6 3836791 3845760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0275 47 361 Miscellaneous Gene Families AT4G00110 27.545 4.33e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0275 K01784 - gmx:100818509 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0275 6 3836791 3845760 Mal6g0275 6 3836791 3845760 ECH
Mal6g0275 6 3836791 3845760 Mal7g5049 7 119649359 119653182 PCT