Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0258 ATGTCTTCCAAAGATGCAGATCCAACCCTAGGTTACCTCACTCGAAAAGACACCGAAGTGAAGCTTCCACGTCCAACTAGGGTTAAGAACAAAACCCCCGCTCCAATTCAAATCACAGCGGAGCAAATTCTTCGTGAAGCGAGGGAGCGTCAAGAAGCTGAGATCCGTCCACCGAAACAGAAAATCACCGATTCAACTGAACTCGGCGAGTATCGTCTCCGGAAAAGAAAGGAATTCGAGGATTTAATCCGGCGTGTTCGGTGGAATGTTAGTGTTTGGATTAAATATGCACAGTGGGAAGAATCGCAGAAAGATTTTACACGCGCGCGATCGGTTTGGGAACGTGCGTTGGAAGTTGATTATAAGAATCATACTTTGTGGTTGAAGTATGCTGAAGTTGAGATGAAGAATAAGTTTATTAATCATGCTAGGAATGTTTGGGATCGCGCGGTTACTCTTTTGCCGCGGGTGGATCAGTTGTGGTATAAGTATATTCATATGGAGGAGATGCTTGGCAATGTCGCTGGGGCGAGGCAGGTTTTCGAGAGGTGGATGAAATGGATGCCGGATCAGCAGGGATGGTTATCTTATATTAAATTTGAGCTGAGATATAACGAGATTGAACGAGCGAGAGGGATTTTCGAGAGATTTGTTTTGTGTCATCCTAGGGTTGGTGCTTGGATACGTTATGCGAAGTTTGAGATGAAGAATGGTGAGGTTCCTAAGGCGAGGAATGTTTATGAGAGAGCGGTGGAGAAGCTTGCGGATGATGAGGAAGCAGAGCTGCTTTTTGTGGCGTTTGCTGAGTTTGAGGAAAGGTGTAAAGAAGCAGAGCGTGCGAGGTGTATTTATAAATTTGCTCTTGATCATATTCCAAAGGGGAGGGCTGAGGATTTGTATCGGAAGTTTGTGGCATTTGAGAAACAGTATGGTGATAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAAGATGAAGTGAGGAAAAATCCATTGAATTATGATTCTTGGTTTGATTATATAAGATTGGAAGAGAGTGTCGGGAATAAGGAAAGAACTAGGGAGGTTTATGAGAGAGCTATAGCTAATGTTCCTCCAGCGGAGGAGAAGCGATACTGGCAGCGCTATATTTATTTGTGGATTAATTATGCACTCTATGAAGAACTTGATGCTGGAGATATGGAGCGAACAAGAGACGTGTACAAGGAGTGTCTCAACCAGATACCTCACCAGAAGTTCTCATTTGCAAAGATATGGCTTCTAGCAGCCCAGTTTGAAATACGTCAGCTGAATCTCACGGGTGCTCGTCAAATATTGGGAAATGCTATTGGAAAGGCTCCTAAAGATAAGATATTTAAGAAGTATATAGAGATAGAACTGCACCTTGGTAATATAGATCGATGCAGAAAACTTTATGAAAAGTATTTGGAGTGGTCACCTGAAAATTGCTATGCATGGAGCAAGTATGCAGAACTAGAGAGATCTTTAGCTGAGACCGAGCGAGCTAGAGCAATATTTGAGCTTGCAATTGCCCAACCAGCATTGGACATGCCTGAGTTGTTGTGGAAGGCATACATTGATTTTGAAACTGCTGAGTGTGAATTTGAGAGAGCAAGATTGCTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGATAAGCTATGCAGAGTTTGAAGCAACAGCTATAGATGAGAGTTTAGACTTATCGGAACAAGAACAAAAGGAGCAATGCCTTAAGCGTGCCAGAAGGGTGTTTGAGGAAGCTCTAAACCACTTCAGATCATCAGCTCCAGAATTAAAGGAAGAAAGGGCAATGCTATTGGAGAAATGGCTCAACTTGGAGGCTTCATCTGGGGAGCTAGGTGATGTTAGCTTAGTCCAGTCTAAGCTGCCCAAGAAGCTCAAGAAGAGAAGAAATGTTTCTACTGAAGATGGTTCTTCTAGAATTGAAGAATTTATCGACTATCTATTCCCTGAGGAAACAAACCCATCCCATCTCAAGATCATGGAAAATGCTTACAAATGGAAGAAGCAAAAATTGTCCAACACTGATGAATAA 2085 0.4269 MSSKDADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFTRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPRVGAWIRYAKFEMKNGEVPKARNVYERAVEKLADDEEAELLFVAFAEFEERCKEAERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERTREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYKECLNQIPHQKFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELHLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLAETERARAIFELAIAQPALDMPELLWKAYIDFETAECEFERARLLYERLLDRTKHLKVWISYAEFEATAIDESLDLSEQEQKEQCLKRARRVFEEALNHFRSSAPELKEERAMLLEKWLNLEASSGELGDVSLVQSKLPKKLKKRRNVSTEDGSSRIEEFIDYLFPEETNPSHLKIMENAYKWKKQKLSNTDE* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0258 694 SMART hat_new_1 205 236 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 468 500 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 353 387 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 435 466 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 70 102 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 397 433 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 538 569 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 319 351 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 172 203 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 502 536 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 104 136 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 238 273 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 138 170 IPR003107 GO:0006396
Mal6g0258 694 SMART hat_new_1 275 309 IPR003107 GO:0006396
Mal6g0258 694 PANTHER PRE-MRNA SPLICING FACTOR 21 691 IPR045075 GO:0000398
Mal6g0258 694 SUPERFAMILY TPR-like 266 522 IPR011990 GO:0005515
Mal6g0258 694 MobiDBLite consensus disorder prediction 1 33 - -
Mal6g0258 694 Pfam HAT (Half-A-TPR) repeat 206 234 IPR003107 GO:0006396
Mal6g0258 694 SUPERFAMILY TPR-like 193 261 IPR011990 GO:0005515
Mal6g0258 694 Gene3D Tetratricopeptide repeat domain 536 665 IPR011990 GO:0005515
Mal6g0258 694 MobiDBLite consensus disorder prediction 10 26 - -
Mal6g0258 694 Coils Coil 494 514 - -
Mal6g0258 694 PANTHER - 21 691 - -
Mal6g0258 694 Gene3D Tetratricopeptide repeat domain 121 321 IPR011990 GO:0005515
Mal6g0258 694 Gene3D Tetratricopeptide repeat domain 322 534 IPR011990 GO:0005515
Mal6g0258 694 SUPERFAMILY TPR-like 80 205 IPR011990 GO:0005515
Mal6g0258 694 SUPERFAMILY TPR-like 525 625 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0258 Mal-Chr6 3581431 3587355 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0258 K12869 - gmx:100811745 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0258 6 3581431 3587355 Mal6g0258 6 3581431 3587355 ECH