Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0257 ATGGATGAAGAATTAGTTGATGATGGAATTCAATTAGAGGCTGTTGAGGATTCACAGCGTCGTCAGAACAAAGACGACGAGGCGAAAATTGTAAAATCTCAATATGATGGTAAAAATGTAGCAGTTGAGGCTGCTACATCACAACATCCATATGCAACAGTTGAAGAACTAACAGTAAAAAGTTACAATGGTTCTAGTTTTGATATTGGTACTTCTAATAGTCATGTTCAAATGTATAGTCAACAAAAACATTGGCAGAATCTTTATCAGATGGGAAATAATTCAGGAAATGGAAATTCAGTTAGTGATTTTGGGTTGATTAATAGTGGGCCCGCGGCTACGTCTAGTGCTTGGGAGGATGTTGGATCCGCCTCGTTTCCGGAGTTATTAGCTAGAAAATCGCATAGTGATGGTCAGAGTAATGTCGTTGAACATTTGACGGCTGCTGAAAGTAAAGAGGGGGCAGGACCTGCAGGTGATGTTCATCTAGGAATACGGACAAAAATGATATCCAAATCAGGGTTTGCTGAGTATTTTATTAAAAATACGTTGAAGAGTAAGGGTGTTGTGCGTAAAGGTCCAGCTTCTGATAGCGTATATGTTCAGTCTAGAGAGCAAAATCAAACAAAGGGTGGAAGTGATGCAAATCAGAATTGGGGTAAGATTGGCATTGATGCAGATCAGAATCAGATGAAGACCAGCACTGGCACAGATCAGAAACAAATGAATACTGGTATTGGTGCTCAGTCAAACTCTAATATATCAGTAAACCGTGGTTCCAAAACTGCCAAGTTTCCGATTCACAGCGATGCTGCGGTGCCTAAATCTAGCACGACTGAATGTGATGGTGTAACATTGAGAGAATGGTTAAAATCTGGCCAGCGCAAATCAGGCAAAGTGGAAAGTTTAAATATATTTAGGAAGATTGTGGATTTGGTGGATGACTCGCACTCTCGGGGAATTGCATTGCATAACATTTGTCCATCTTTCATTAAATTGTTACCATCGAATCAGGTCATGTACATTGGGTTACCTACTCAAAAACAGACGACAGGTAAAAGGGTGTCTGAGCAAGTAACATCTTCCTCTGTTGATATGGGGTCCAAGAAACAAAAATTTGACGAGAGTACGAGGGTTACTGGGAGTGACTTGTGTCCCGAGACTGCTAGTCATCATGAAGTTCAAATTCCTTCAATTGGATCACAAGATTATCGAAACAGATATGAGGAAGATAACCAATTTTCTGTGTATAATTTTGGGAGAATGTCTAGCATCCCTCGTGTATCTAATTCAGGTCAATTGTCATCTACTAGTAATTCGTTATGTGAAAGATGGGAAAGTAAGTGGTATGCGAGTCCTGAGGGAGGTTGCACAACATCATCAAATATCTACTGCCTCGGTGTCCTCCTTTTTGAGTTACTAGGTCACTTTGACTCTGAAAGAGCGCATATTGCAGCAATGTCTGATCTTCATCATAGGATTCTTCCTCCAGCTTTCCTATCAGAAAATCCTAAGGAAGCTGGCTTTTGTCTTTGGCTGTTGCATCCTGAACCATCATCACGTCCAACCACAGGGGAAGTCCTACAATCTGAAGTGATTAATGGATTACAAGAGTTGTGTAGTGAGGAATTGTCATCATGTATAGACCAAGAAGATGCAGAATCGGAATTGTTATTGCATTTCCTCATCTCATCGAAAGAGCAGAAGCAGGGTGATGCCTCCAAATTGGTTGAACAATTAGAGTGCTTGGAATCAGATATAGAAGAGGCAGAGAGGAGGCATGGCTTAAGAAAATCCTCGGTTTCCTCTGGCTTGCAGAACAATTACGCTTGTCAGAAAGAGATTATGCCTCTTCAAAAGGAACTTTTGAGTGTAGAAAGACTGCCGACAGAATCCCCAATCTCTAATACAAATGAACTGAGATTGATGAGAAATATAGGCCATCTTGAAAGTGCTTACTTTTCCATGAGATCCAAAGTTCAGCTTTCTGAAACAGATGCCACAGATCACCCAGATAAAGATATACTTAGAACTCGCGAGAACTGGTCTGTGACCCAAAAAGGCGAGGAACAACATAAAAGTAAAGATGCTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTATGCACGTTACAGTAGGCTTCAAGTGCGGGGTATACTAAGAAATGCAGATTTTAACAATCCTGCGAATGTGATATGCTCTCTGAGCTTTGATCGGGATGAAGATTACTTTGCTTCTGCTGGGATATCTAAGAAAATAAAAATCTTTGACTACAATACACTTTGCAATGACTCTGTTGATATCCATTATCCTGCTGTCGAGATGTCAAACAGATCAAAGCTCAGCTGTGTTTGCTGGAATAACTATATTAAGAACTATCTTGCCTCTACAGACTACGACGGTGTAGTGAAGTTATGGGATGCTAGTACAGGTCAAGAATTTTCTCAATACAGTGAACATGAAAAGAGGGCTTGGTCTGTTGACTTTTCTCCGGTATGCCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGCATTAGTGAGAGAAACTCTTTAGGCACAATCAGGAATGTTGCTAATGTCTGCTGTGTTCAATTTTCTGCTGATTCCTCTCATTTGGTGGCCTTTGGATCTGCAAATTACTCAACTTACTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGCGTATTGGTTGGCCATCGTAAAGCTGTAAGCTATGTCAAATTCTTAGACTCTGAAACACTTGTTTCTGCGTCTACTGATAATTCATTGAAGATCTGGGATCTCAATAAAACCTCTTCGGTTGGTGCATCTACTAGTGCTCGCAGCCTAACCCTGTCTGGACATACTAATGAAAAGAATTTTGTGGGTTTATCTGTTGCTGATGGATATATTGCCTGTGGTTCGGAATCAAATGAGGTTTACACCTACTATAAATCACTTCCCATGCCAATTACTTCACACAAGTTTGGATCTATTGATCCCATCTCTGGTAAAGAGACTGATGACGACCATGGTCAGTTTGTTTCAAGTGTGTGCTGGAGAGGGAAATCAAACACGCTTCTTGCGGCCAATTCAAGTGGATGTATAAAAGTGTTACAGATGGTTTAA 3129 0.4062 MDEELVDDGIQLEAVEDSQRRQNKDDEAKIVKSQYDGKNVAVEAATSQHPYATVEELTVKSYNGSSFDIGTSNSHVQMYSQQKHWQNLYQMGNNSGNGNSVSDFGLINSGPAATSSAWEDVGSASFPELLARKSHSDGQSNVVEHLTAAESKEGAGPAGDVHLGIRTKMISKSGFAEYFIKNTLKSKGVVRKGPASDSVYVQSREQNQTKGGSDANQNWGKIGIDADQNQMKTSTGTDQKQMNTGIGAQSNSNISVNRGSKTAKFPIHSDAAVPKSSTTECDGVTLREWLKSGQRKSGKVESLNIFRKIVDLVDDSHSRGIALHNICPSFIKLLPSNQVMYIGLPTQKQTTGKRVSEQVTSSSVDMGSKKQKFDESTRVTGSDLCPETASHHEVQIPSIGSQDYRNRYEEDNQFSVYNFGRMSSIPRVSNSGQLSSTSNSLCERWESKWYASPEGGCTTSSNIYCLGVLLFELLGHFDSERAHIAAMSDLHHRILPPAFLSENPKEAGFCLWLLHPEPSSRPTTGEVLQSEVINGLQELCSEELSSCIDQEDAESELLLHFLISSKEQKQGDASKLVEQLECLESDIEEAERRHGLRKSSVSSGLQNNYACQKEIMPLQKELLSVERLPTESPISNTNELRLMRNIGHLESAYFSMRSKVQLSETDATDHPDKDILRTRENWSVTQKGEEQHKSKDALGTFFDGLCKYARYSRLQVRGILRNADFNNPANVICSLSFDRDEDYFASAGISKKIKIFDYNTLCNDSVDIHYPAVEMSNRSKLSCVCWNNYIKNYLASTDYDGVVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNSLGTIRNVANVCCVQFSADSSHLVAFGSANYSTYCYDLRNLRSPWCVLVGHRKAVSYVKFLDSETLVSASTDNSLKIWDLNKTSSVGASTSARSLTLSGHTNEKNFVGLSVADGYIACGSESNEVYTYYKSLPMPITSHKFGSIDPISGKETDDDHGQFVSSVCWRGKSNTLLAANSSGCIKVLQMV* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0257 1042 Gene3D - 701 1042 IPR015943 GO:0005515
Mal6g0257 1042 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 903 936 - -
Mal6g0257 1042 MobiDBLite consensus disorder prediction 1 30 - -
Mal6g0257 1042 ProSitePatterns Trp-Asp (WD) repeats signature. 921 935 IPR019775 -
Mal6g0257 1042 PRINTS G protein beta WD-40 repeat signature 921 935 IPR020472 -
Mal6g0257 1042 PRINTS G protein beta WD-40 repeat signature 794 808 IPR020472 -
Mal6g0257 1042 PRINTS G protein beta WD-40 repeat signature 837 851 IPR020472 -
Mal6g0257 1042 MobiDBLite consensus disorder prediction 352 384 - -
Mal6g0257 1042 PANTHER PROTEIN SPA1-RELATED 2 35 1042 IPR044630 GO:0009640
Mal6g0257 1042 MobiDBLite consensus disorder prediction 13 30 - -
Mal6g0257 1042 MobiDBLite consensus disorder prediction 352 367 - -
Mal6g0257 1042 Gene3D Transferase(Phosphotransferase) domain 1 281 542 - -
Mal6g0257 1042 ProSiteProfiles Trp-Asp (WD) repeats profile. 817 859 IPR001680 GO:0005515
Mal6g0257 1042 ProSiteProfiles Trp-Asp (WD) repeats profile. 774 816 IPR001680 GO:0005515
Mal6g0257 1042 ProSitePatterns Trp-Asp (WD) repeats signature. 794 808 IPR019775 -
Mal6g0257 1042 SUPERFAMILY Protein kinase-like (PK-like) 281 540 IPR011009 -
Mal6g0257 1042 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 817 852 - -
Mal6g0257 1042 Pfam WD domain, G-beta repeat 812 850 IPR001680 GO:0005515
Mal6g0257 1042 Pfam WD domain, G-beta repeat 902 934 IPR001680 GO:0005515
Mal6g0257 1042 MobiDBLite consensus disorder prediction 226 258 - -
Mal6g0257 1042 SUPERFAMILY WD40 repeat-like 726 1039 IPR036322 GO:0005515
Mal6g0257 1042 ProSiteProfiles Trp-Asp (WD) repeats profile. 903 943 IPR001680 GO:0005515
Mal6g0257 1042 SMART WD40_4 896 934 IPR001680 GO:0005515
Mal6g0257 1042 SMART WD40_4 853 892 IPR001680 GO:0005515
Mal6g0257 1042 SMART WD40_4 767 807 IPR001680 GO:0005515
Mal6g0257 1042 SMART WD40_4 810 850 IPR001680 GO:0005515
Mal6g0257 1042 SMART WD40_4 1001 1040 IPR001680 GO:0005515
Mal6g0257 1042 SMART WD40_4 718 757 IPR001680 GO:0005515
Mal6g0257 1042 SMART WD40_4 945 984 IPR001680 GO:0005515
Mal6g0257 1042 PANTHER PROTEIN SPA1-RELATED 2 35 1042 - -
Mal6g0257 1042 Coils Coil 566 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0257 Mal-Chr6 3571533 3579022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0257 794 952 Miscellaneous Gene Families AT5G08390 26.667 2.72e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0257 K16240 - gmx:100778303 1562.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0257 6 3571533 3579022 Mal6g0257 6 3571533 3579022 ECH