Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0230 ATGGAAACGAACACTTCGTCGCCATTGTCGACGCAACCAGAATCAGGTGCAATGAATGCAACCGGAAACCCAGCATCGCCGTCGCTAGTCAATTTGTATAGAATCACCAAAGTTCTCGAGCGTTTAGCCACACATTTTGTACCCGGAAACCGAAGCGATTCTTTCGAATTTTTTAACCTATGTCTCTCCCTTTCGAGAGGGATTGATTATGCACTTGCCAACGGTGAAGTTCCGCCGAAAGCTAATGAATTACCTATTTTGATGAAACATGTTTGTGGCGTTTACCTTTCCTCTTTGACACAGATGTATCAAAGAAAGGCCGATGAACATTCACAAGCAGCTGTGATGGTTTTGATGATCTCTGTGAAGAATGCCTGTGAAATTGGATGGTTCCAGGAGAAAGATTCAAAAGAACTTTTAACCATTGCTGACAAGATAGGAAAAAGCTACTGCACCCTGGGAAATGCAATTGCCGAACCTAATTCTTGCCATCCTGCAGTATTAACTATAATGCAAAGGTACTATCCTAATATGGAATTGGGTCCAATAATCGTTTCAATTGAAGCCAAGCCGGGTTATGGAGCTTCTGCTGTTGACTTCCACATCACAAAGAATAACGTTCAATCAGATAAAAAAATTTGGTTATTGGTGGCCCAAATTGATAACATTGAGACATCTGCATGCCTCATCAGTCCTCAGCAAGTAAATTTTCTCCTGAATGGAAAAGGAATTGATACAAGGACCAACTTTCGAATGGATCCTGGACCACAGATGCCCACCAGTGTGAGTAGTATTCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGTCAGTTCAATGGGCATTATATTATACTTGTTGCCTATATGAGTGTTGCATCCTTGCCTGCGCATCCGGTTCTTCCTCCAGATTATGTTCAGCCTGCTGTATCTGTTGATGCAGATTCAGATATTATCGAGGGGGCATCACGAATCTCACTTAATTGCCCGATAAGCCGTACACGTATCAAGATTCCTGTTAAAGGGCGTTCATGCAAACATTTTCAGTGCTTTGACTTTGATAACTTCATTAAAATAAATTGTAAGAGGCCATCCTGGCGCTGCCCCCATTGCATTCAGAATGTCTGCTATACAGAAATTCGTCTTGACAGAAACATGATTGAGATCCTGGAAAAAGTTGGTGAGAACATTGTGGAAGTGACTTTTGAAGCTGATGGATCATGGAAGGAAGGCTCGGAAGATGATCATGACATGGATAAGATACAGATTAAGGCCCACGATTGTCAAATGGGACAGACTGAACAACAAGAATCTACTTGCTCCCCTGATACTGTTTCCAATATCGTGGACCTCACCAACAATGATAATGATTTGGACATAGTGGGAACTTATGAAACTGCAGATAGAAAGCCTTTTCAGGCTTCTGCTCCGACTGAAGATGACTTTTGGGCTGGACTTTATATTGCCAACAGTGGGTCCGTTACCCCTACAGCTGGTGTCGACATTCATGTTCTGGCTGATGCTGTATTTAATCAAGAAGCTGAAGGTCACGACATTATTCCTGCCATGCATAACCAGTTTCCACCACAGAGTAACTTGACGTTGATGGATTATATGAATTCAGTTAGCGAGTATGGGAGGTCATCCTCGGCAACGAGAATTATTGATAGAACTCCTTCAGCTGTTCAGGCCCTCCCAGTCCAATCTCAGACATTAGGATCACAGCAAAATTCAGTAACTAATTTGGATTCCTTGATAACCAGCAGTCCGTCTGCTACTCCTAATGTTTCTTTGTCCAACCCTGCCTCTGCAGATCCTTACAATGCCATTATGAGTGATGCAGAAAGACAGCAACTTTTTTCTCGATCCACATTGAATATGGCTCCAGTCTCAGCAGTAACACAGAACCGAGTGCCAACCGTTAATATGTCAGCCACAACTCATAACCGAGTACTACCAGCTAATATGTCAGCCGCAACTCATAACCGAGGACCAAGTCAATTGCATAACCCACCATACAGAACAGGAATGCTGAACGACTTTAGAAATTCACACCTGCAGCAAACTCTGAATTCCCATGCACACCAACCAATGCAACCATCAAATGCTCAAAGGTCTCACATCCAGCAAGGGGGTTCACATGGTTATGGAGCTGGAGCTGCAGCAAGTAGCCAACAGGCCAGGGTTATGGCTTCATCACATTTTGCGAGACAAGGAGAGCAAAGAGGACCACCAGTACAGGCAGTTTCTAGCACAGATGAATTGTTCAATTCACAACCAGATCAGAATTGGCGTCCTACTTCGCGAATGCGTGGAAGTCTTTCAGGTCAGCAGCTTACTGATGATGTTAGGCAGCGATTAATTATGCCATCATCACAACAAGTTCAGAGTTCAAGACCACAAGGTCCACAACCAGGCCGAACAACATCTTCACTGGATGCGCTCATTGCTAACAATAGAAATGCCCAGAATCCTTAG 2478 0.4346 METNTSSPLSTQPESGAMNATGNPASPSLVNLYRITKVLERLATHFVPGNRSDSFEFFNLCLSLSRGIDYALANGEVPPKANELPILMKHVCGVYLSSLTQMYQRKADEHSQAAVMVLMISVKNACEIGWFQEKDSKELLTIADKIGKSYCTLGNAIAEPNSCHPAVLTIMQRYYPNMELGPIIVSIEAKPGYGASAVDFHITKNNVQSDKKIWLLVAQIDNIETSACLISPQQVNFLLNGKGIDTRTNFRMDPGPQMPTSVSSILKFGTNLLQAVGQFNGHYIILVAYMSVASLPAHPVLPPDYVQPAVSVDADSDIIEGASRISLNCPISRTRIKIPVKGRSCKHFQCFDFDNFIKINCKRPSWRCPHCIQNVCYTEIRLDRNMIEILEKVGENIVEVTFEADGSWKEGSEDDHDMDKIQIKAHDCQMGQTEQQESTCSPDTVSNIVDLTNNDNDLDIVGTYETADRKPFQASAPTEDDFWAGLYIANSGSVTPTAGVDIHVLADAVFNQEAEGHDIIPAMHNQFPPQSNLTLMDYMNSVSEYGRSSSATRIIDRTPSAVQALPVQSQTLGSQQNSVTNLDSLITSSPSATPNVSLSNPASADPYNAIMSDAERQQLFSRSTLNMAPVSAVTQNRVPTVNMSATTHNRVLPANMSAATHNRGPSQLHNPPYRTGMLNDFRNSHLQQTLNSHAHQPMQPSNAQRSHIQQGGSHGYGAGAAASSQQARVMASSHFARQGEQRGPPVQAVSSTDELFNSQPDQNWRPTSRMRGSLSGQQLTDDVRQRLIMPSSQQVQSSRPQGPQPGRTTSSLDALIANNRNAQNP* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0230 825 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 37 683 - -
Mal6g0230 825 MobiDBLite consensus disorder prediction 744 825 - -
Mal6g0230 825 MobiDBLite consensus disorder prediction 690 825 - -
Mal6g0230 825 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 302 410 IPR013083 -
Mal6g0230 825 MobiDBLite consensus disorder prediction 690 711 - -
Mal6g0230 825 MobiDBLite consensus disorder prediction 1 23 - -
Mal6g0230 825 Pfam MIZ/SP-RING zinc finger 325 372 IPR004181 GO:0008270
Mal6g0230 825 CDD SP-RING_PIAS_like 326 371 - -
Mal6g0230 825 ProSiteProfiles Zinc finger SP-RING-type profile. 314 395 IPR004181 GO:0008270
Mal6g0230 825 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 37 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0230 Mal-Chr6 3306035 3314666 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0230 K04706 - gmx:100784204 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0230 6 3306035 3314666 Mal6g0230 6 3306035 3314666 ECH