Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0228 ATGAGGTGCTGTTTGTTGATAAGTGTTTTGATGTTGTGGTTTGCCATGAGTAGTAAGAATAATGGACTGTTAGCCATAATGGACGAGGAATTGATCAGAAAAAGTTCCTCGACTAATTATGACTATGCAGATGCTCTTGGCAAAGCCATCTTGTTTTTTGAAGGACAACGCTCAGGGAAATTGCCTAGAGATCAAAGAGTGGAGTGGAGGGGAGATTCAGCACTCTCTGATGGCAAGCCTCAAAATGTGAATTTGGTTGGAGGATACTACGATGCGGGTGATAATGTGAAGTTTGGATGGCCGATGTCATTTACTGTGAGCTTATTGAGCTGGGCTGCTGTTGAATATCAAAGTGAGATTTCTTCGGTGAACCAGCTTGATTACCTCCACAGTGCTATTCGTTGGGGTGCAAATTTCATACTTCAAGCTCACACTTCTCCAACCACGCTCTTTACACAGGTTGGAGATGGAAACGCTGACCATCAATGTTGGGAGCGCCCGGAAGACATGGATACACCAAGAACAGTTTACAAGATTGATGCTAACTCCCCTGGAACTGAGGCTGCAGCTGAGGCTGCTGCTGCTCTTTCTGCTGCTTCAATTGTCTTTAAGAAAATAGATAGCAGTTATTCGTCGAAGCTATTAAGCCAATCAAAATCTCTGTTTGATTTTGCTGACAAGTATAGAGGCAGTTACTCGGGTTCTTGCCCATTCTACTGCTCATACTCTGGTTACCATGATGAACTGTTATGGGCTGCTGCATGGCTATACAAGGCCAGCGGCGAAAGCAAGTACTTGAAGTACATCATAGACAATCAAGGTTGGAGTCAGGCAGTGTCTGAGTTTAGTTGGGATAACAAATTTGTTGGAGCTCAAACATTACTAACACAGGAATTCTATGGAGGGAAGAAGGACTTAGCCAAGATTCATAGTGATGCTGAATCATTTGTATGTGCATTGATGCCAGGAAGTGGCTCTTTACATATTAAAACTACTCCTGGTGGGCTTCTATATACTAGAGATAGAAGCAATTTGCAATATACCACAACCTCAACCATGGTGCTATTCATTTTCTCCAAAATCCTAAACAAAAATCATATTCATGGAATCCATTGTGGCTCTACCAATTTCACCTCCTCTGAAATTAGAGCCTTTGCAAAATCACAGGTGGACTATATACTAGGAAACAATCCCATGAAGATGTCATACATGGTGGGATATGGGAATAAATATCCAAAACAATTACATCATAGAGGTTCTTCCATCCCTTCAATCAAAGTTCACCCAACCAAAGTGGGTTGCAATGATGGCCAATCAAACTATTTCTTTTCATCTAATCCTAATCCTAATACTCATGTGGGTGCTATTGTTGGGGGACCTGATTCTAATGACCAATTCAATGATGCAAGATATGATTACTCTCATTCAGAACCTACCACCTATATGAATGCTGCTTTCATAGGTTCTGTTGCAGCTTTGATTGGTGAAACTAAAACCGGGACAATGTAG 1509 0.4155 MRCCLLISVLMLWFAMSSKNNGLLAIMDEELIRKSSSTNYDYADALGKAILFFEGQRSGKLPRDQRVEWRGDSALSDGKPQNVNLVGGYYDAGDNVKFGWPMSFTVSLLSWAAVEYQSEISSVNQLDYLHSAIRWGANFILQAHTSPTTLFTQVGDGNADHQCWERPEDMDTPRTVYKIDANSPGTEAAAEAAAALSAASIVFKKIDSSYSSKLLSQSKSLFDFADKYRGSYSGSCPFYCSYSGYHDELLWAAAWLYKASGESKYLKYIIDNQGWSQAVSEFSWDNKFVGAQTLLTQEFYGGKKDLAKIHSDAESFVCALMPGSGSLHIKTTPGGLLYTRDRSNLQYTTTSTMVLFIFSKILNKNHIHGIHCGSTNFTSSEIRAFAKSQVDYILGNNPMKMSYMVGYGNKYPKQLHHRGSSIPSIKVHPTKVGCNDGQSNYFFSSNPNPNTHVGAIVGGPDSNDQFNDARYDYSHSEPTTYMNAAFIGSVAALIGETKTGTM* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0228 502 SUPERFAMILY Six-hairpin glycosidases 39 497 IPR008928 GO:0005975
Mal6g0228 502 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 466 484 IPR033126 -
Mal6g0228 502 PANTHER ENDO-1,4-BETA-GLUCANASE 3 497 - -
Mal6g0228 502 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 392 418 IPR018221 -
Mal6g0228 502 Gene3D - 38 496 IPR012341 GO:0005975
Mal6g0228 502 Pfam Glycosyl hydrolase family 9 42 488 IPR001701 GO:0004553|GO:0005975
Mal6g0228 502 PANTHER ENDOGLUCANASE 18-RELATED 3 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0228 Mal-Chr6 3288284 3291084 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0228 41 494 Glycoside Hydrolase AT4G23560 72.247 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0228 - - cam:101489803 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0228 6 3288284 3291084 Mal6g0228 6 3288284 3291084 ECH