Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0226 ATGGAAGAAGCTCTCCCAAACTCGTCGCTAAAGTTTTTCACCGATCAAGAGCTTTGCTACGCCGATATCGTTCCTCCTTCTCAGGTTCGAGCAAGAATTGAAGTTTCAGTTCTCAGTTTCCTCAAAATATTGAATGCGTCAAACCCTGCTATATCCGATTTGCCTTTGGTTCAAAGAAAATTGAGCAACAGTCGAGTGAATCACGGCCTGTTAACTGAATTATCATATGTCTTTCTCTCCAATTCTGTATCTACAAGGTCTCTTATGAGACCTAATGCTGCAAAAGCCTTTGTGAGGGTGTGGAAGGTGATGGAAATGTGCTATCAGATATTGCTTCAGGAAAAGCGTGTCACACAGAGGGAACTCTTCTACAAGCTACTGTGTGATTCACAACATCTGTTTCCTTCTCAGAAGGATGTCAATAGGACAATCCAAGATCTTGTAGCATTGCTTCGTTGCAGCAGATACAGTCTTGGAATCATGGCATCTAGTCGAGGACTCATTGCTGGCCGTCTGATTTTGCAGGAACCGGGCAAAGAGGCCGTTGATTGCTCTGTTTATGGATCTTCTGGACATGCAATTTCTGGTGACTTGAATTTGTTAGACAAATTGATTCTAAATGCAGATGCACGTTACATTATAGTGGTGGAAAAGCATGCAATATTTCAACGGCTTGCTGAAGATAGATTTTTTAATCAAATTCCAAGCATTCTTATCACGGCTAAAGGTTATCCAGATATGGCCACAAGATTTCTTCTTCATCGAATCAGTCGAGCATTTCCAGACTTGCCAATTTTAGCTTTGGTGGATTGGAATCCAGCTGGATTAGCTATACTATGCACCTTCAAATTTGGAAGTGTAGGAATGGGCCTGGAGTCATATAGATACGCTTGCAATGTCAAGTGGTTAGGACTGCGGGGGCATGATCTACCGATGCTGCCTGATCAATCTTTCGTTCCACTGAAGACAAAGGACCTACAAATTGCTCAAAGCTTGATGTCCTCAAGAATCTTACCGGAGAATTACAAGGAAGAGGTCGCCTTGATGGTTCAGAGCGGCAGGAGAGCTGAAATCGAAGCCCTATACTTTCATGGATATGATTATTTGGGGAAGTACATAGCTAAAAAAATTGTACAGTCCGATTATGTATAA 1152 0.421 MEEALPNSSLKFFTDQELCYADIVPPSQVRARIEVSVLSFLKILNASNPAISDLPLVQRKLSNSRVNHGLLTELSYVFLSNSVSTRSLMRPNAAKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCDSQHLFPSQKDVNRTIQDLVALLRCSRYSLGIMASSRGLIAGRLILQEPGKEAVDCSVYGSSGHAISGDLNLLDKLILNADARYIIVVEKHAIFQRLAEDRFFNQIPSILITAKGYPDMATRFLLHRISRAFPDLPILALVDWNPAGLAILCTFKFGSVGMGLESYRYACNVKWLGLRGHDLPMLPDQSFVPLKTKDLQIAQSLMSSRILPENYKEEVALMVQSGRRAEIEALYFHGYDYLGKYIAKKIVQSDYV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0226 383 PRINTS DNA topoisomerase VI subunit A family signature 137 154 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mal6g0226 383 PRINTS DNA topoisomerase VI subunit A family signature 237 258 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mal6g0226 383 PRINTS DNA topoisomerase VI subunit A family signature 155 170 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mal6g0226 383 PRINTS DNA topoisomerase VI subunit A family signature 213 230 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mal6g0226 383 PRINTS DNA topoisomerase VI subunit A family signature 270 286 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mal6g0226 383 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 16 382 - -
Mal6g0226 383 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 16 382 IPR002815 GO:0003677|GO:0003918|GO:0005694
Mal6g0226 383 SUPERFAMILY DNA topoisomerase IV, alpha subunit 94 383 IPR036078 GO:0003677|GO:0005694
Mal6g0226 383 Gene3D - 164 383 - -
Mal6g0226 383 CDD TOPRIM_TopoIIB_SPO 211 368 IPR034136 -
Mal6g0226 383 Pfam Type IIB DNA topoisomerase 95 160 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Mal6g0226 383 Gene3D - 23 163 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0226 K10878 - gmx:100784732 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0226 6 3279047 3282747 Mal6g0226 6 3279047 3282747 ECH