Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0224 ATGTCTGCATCTTCTTCTCTAACAGCATCTTCCCTATCATTCCCATTCACATCATCCCCCAAATCATCTCACCCAATTCCCTTCTCTTGTTCTTTTCCTCTCAAACACCATACCCTCCATCTCAAATCATCACCATCACTGTTTGTCTCTGCTTCAGGAGCTGCAACACCCACAACCTCAATTGAAGTCGACAAATCCCCAATCTCCGCCAATCCTTCAAAGGTTCTTCCTTTTCGGGTTGGCCATGGTTTTGACCTTCATCGATTGGAACCTGGTTACCCCTTAATTATTGGTGGAATTAATATACCCCATGATAAAGGCTGTGAGGCTCATTCTGATGGGGATGTTCTGCTTCACTGCGTGGTTGATGCAATTTTAGGGGCTTTAGGTCTTCCTGATATAGGCCAGATTTTTCCTGATTCCGATCCTAAGTGGAAAGGTTGTGATTCTTCGGTGTTCGTCCACGAATCTGTCAGGCTTATGCATGAGGCAGGTTATGATATTGGAAATTTAGATGCAACATTGATACTTCAGAGGCCGAAAGTAAGCCCGCACAAGGATGCTATCAAGTCCAACTTATCTGCACTGCTCGGAGTTGACGCTTCTGTGGTAAATATAAAGGCAAAAACTCATGAAAAGGTTGACAGTCTTGGAGAAAATAGAAGTATAGCGGCTCACACAGTTGTTCTTCTAATGAAGAAATGA 705 0.4355 MSASSSLTASSLSFPFTSSPKSSHPIPFSCSFPLKHHTLHLKSSPSLFVSASGAATPTTSIEVDKSPISANPSKVLPFRVGHGFDLHRLEPGYPLIIGGINIPHDKGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGCDSSVFVHESVRLMHEAGYDIGNLDATLILQRPKVSPHKDAIKSNLSALLGVDASVVNIKAKTHEKVDSLGENRSIAAHTVVLLMKK* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0224 234 Hamap 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 78 233 IPR003526 GO:0008685|GO:0016114
Mal6g0224 234 Pfam YgbB family 78 231 IPR003526 GO:0008685|GO:0016114
Mal6g0224 234 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE 8 234 - -
Mal6g0224 234 SUPERFAMILY IpsF-like 77 233 IPR036571 GO:0008685|GO:0016114
Mal6g0224 234 ProSitePatterns 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 112 127 IPR020555 GO:0008685
Mal6g0224 234 TIGRFAM ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 79 233 IPR003526 GO:0008685|GO:0016114
Mal6g0224 234 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC 8 234 IPR003526 GO:0008685|GO:0016114
Mal6g0224 234 MobiDBLite consensus disorder prediction 1 23 - -
Mal6g0224 234 CDD MECDP_synthase 79 231 IPR003526 GO:0008685|GO:0016114
Mal6g0224 234 Gene3D - 75 234 IPR036571 GO:0008685|GO:0016114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0224 K01770 - gmx:100306378 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0224 6 3272015 3273974 Mal6g0224 6 3272015 3273974 ECH