Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0208 ATGGTGAATCGACGCTTCACTCAGGTAGCCACAAGCGACGATGAAGAAGACGAAGCACCACCATCACCACCATCACCACCACCTCAACATCATTCGAAGCTTCGCAAACGGAAGAAGATGAAGCTTATAGACGAAGAAGAAGAAGAATCCAACGATGATAGCAATAACGATAGCGATGACAAGGACGAAGAGAAAAAAGATGCGCCTCAAACTCCAGAGGATGCAAAGCCAATTGGTGAACCTCTTAGGGTTTCGGGTAAAGGAAGAGGGAGGAAGAGACATTACGAATCGTTTGAGTTTGATGGAAATCAATATTCTCTTGAGGATCCTGTAATGCTTGTGCCTGAGGATAAAGAACAAAAACCATATGTAGCTATAATTAAGGACATTATACAGTACTTTAGTGGCAGCATAATGGTGGCAGGGCAGTGGTTTTATCGACCTGAAGAAGCTGAAAAAAAAGGTGGCGGAAGCTGGAAATCGTGTGATACAAGGGAGCTTTTTTATAGTTTCCACCGTGATGAGGTTCCTGCTGAGTCTGTTATGCACAAGTGTGTGGTGCATTTTGTTCCTTTAAACAAACAGTTTCCGAAACGTAAGCAACATCCTGGCTTTATTGTACAAAGGGTGTATGACACTTTGGAAAGGAAACTCTGGAAGCTGACGGATAAGGACTACGAGGATGTTAACCAGCAAGAAATTGATGAGCTTGTTCAGAAAACTATAAAACGCATCGGTGATCTACTCGACATTGAGCCCGAAGAAGCCCCTCCTGCTATTCAGGAGGACATGACGAAAAATAAAAGAAGCTTAAGGAGAAAGAGCATTTCTCCCATTGATGTTTCAAGGGAGGACGAAGGAGTTTCTAAGAGTGACCAACATTCCAAGCCTGAAACACCAGGGAGTTGTGCAAATAATGACTCAGAGTATCATCGCATATTAGTAAAGTTCAATGCTCTAACTGGAAACATTCATCGTGACAAATGGTTGGAGAGGTTGCTTCAACACATTCAGTACATGTGTAATAATGATGATAGTAGTGAAAGGGAAAAAGGATCAGGAAATGCTGAGTCTGATGAAATCAAGAATAAAAACAGTGATAGAACTTCAGAAATAGCAAATGACTCTCAGGACAAGGGTCAGAAGAGTTCCGAGTCTTTTGTGTGGCCAGATGCTGCTGTTTCAGCCATAGTTGCTCTTGAAAAAGCTTCCCATGAGGCTTTTTCAACAGATTTTCAGAAGTGTAACCAAAAGTTGCGGCAATTAGATTTTAATCTCAAGAACAATGCATTGCTAGCACGCCGTCTGTTAAATGGAGAGTTGAAACCTTCTAAAATTTTGAATATGACACCCATTGAATTAAAGGAGGGTTTGACTGCTGAGGAAAAAACCAAGAAGGAGCCTGATGAGAAACAGCACATGCAAATGACAGATGCCCGGTGCTCAAGATGCACGGATTCTAAGGTGGGCTTGAGGGAGATTATCCATGCTGGACATGATGACCGTTATCAGCTGGAATGTGTTTCATGTGGTAATTCCTGGTATGCCTCCCGGGATGAGGTTTCTACACTGACCATAGACGCATTGGATTCAAAGAAAAGCATAGGCATAGCGCCATCTTCCACTGCAAAATTTGAAGATGTTCAGAAGAAGCTGGTGAGCCCCCGGGAATCTGAAAACTCAGCTGATGACATCTCTAAGAAAACAGGTGAACCATCTATGCCTGTTTTGGCCGCCCAGAAGTCATTTGGCAATCCCAAGAAAGATGACAATGTTGAGGTCAAAAGACATGCTGATAAAGAATGA 1806 0.4264 MVNRRFTQVATSDDEEDEAPPSPPSPPPQHHSKLRKRKKMKLIDEEEEESNDDSNNDSDDKDEEKKDAPQTPEDAKPIGEPLRVSGKGRGRKRHYESFEFDGNQYSLEDPVMLVPEDKEQKPYVAIIKDIIQYFSGSIMVAGQWFYRPEEAEKKGGGSWKSCDTRELFYSFHRDEVPAESVMHKCVVHFVPLNKQFPKRKQHPGFIVQRVYDTLERKLWKLTDKDYEDVNQQEIDELVQKTIKRIGDLLDIEPEEAPPAIQEDMTKNKRSLRRKSISPIDVSREDEGVSKSDQHSKPETPGSCANNDSEYHRILVKFNALTGNIHRDKWLERLLQHIQYMCNNDDSSEREKGSGNAESDEIKNKNSDRTSEIANDSQDKGQKSSESFVWPDAAVSAIVALEKASHEAFSTDFQKCNQKLRQLDFNLKNNALLARRLLNGELKPSKILNMTPIELKEGLTAEEKTKKEPDEKQHMQMTDARCSRCTDSKVGLREIIHAGHDDRYQLECVSCGNSWYASRDEVSTLTIDALDSKKSIGIAPSSTAKFEDVQKKLVSPRESENSADDISKKTGEPSMPVLAAQKSFGNPKKDDNVEVKRHADKE* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0208 601 MobiDBLite consensus disorder prediction 253 306 - -
Mal6g0208 601 MobiDBLite consensus disorder prediction 549 566 - -
Mal6g0208 601 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 594 - -
Mal6g0208 601 MobiDBLite consensus disorder prediction 544 601 - -
Mal6g0208 601 MobiDBLite consensus disorder prediction 586 601 - -
Mal6g0208 601 MobiDBLite consensus disorder prediction 259 293 - -
Mal6g0208 601 SMART BAH_4 103 222 IPR001025 GO:0003682
Mal6g0208 601 SMART mid_6 359 464 IPR003618 GO:0006351
Mal6g0208 601 ProSiteProfiles TFIIS central domain profile. 325 482 IPR003618 GO:0006351
Mal6g0208 601 MobiDBLite consensus disorder prediction 344 386 - -
Mal6g0208 601 Pfam BAH domain 104 220 IPR001025 GO:0003682
Mal6g0208 601 SUPERFAMILY Elongation factor TFIIS domain 2 320 455 IPR036575 GO:0006351
Mal6g0208 601 MobiDBLite consensus disorder prediction 59 73 - -
Mal6g0208 601 MobiDBLite consensus disorder prediction 1 91 - -
Mal6g0208 601 CDD BAH_plant_3 85 231 - -
Mal6g0208 601 Gene3D - 26 204 IPR043151 -
Mal6g0208 601 Gene3D - 344 456 IPR036575 GO:0006351
Mal6g0208 601 ProSiteProfiles BAH domain profile. 103 222 IPR001025 GO:0003682
Mal6g0208 601 Pfam Transcription factor S-II (TFIIS), central domain 321 473 IPR003618 GO:0006351
Mal6g0208 601 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 594 - -
Mal6g0208 601 MobiDBLite consensus disorder prediction 344 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0208 Mal-Chr6 2990451 2994465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0208 - - cam:101495294 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0208 6 2990451 2994465 Mal6g0208 6 2990451 2994465 ECH