Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0192 ATGGCGTTACAAGGAAAGCTAGATAGATTCAAAAAGCAGCAAGAAAAATGTCAATCTACGCTATCAAGCATAGCAGCAAGCAAGTCTGTATCTGCATCTGCGCCAAATCCTCTTGCTCCTGTCAAATTTTCGACCGATACAGAGAGACTTCAACATATTAATAGTATTCGTAAAGCCCCTGTTGGAGCCCAGATGAAGCGTGTTATTGATCTTCTTTATGAGACTCGGCAGGCTTTAACATTGGAGCAAATAAATGAAACATGCCATGTGGACATGAAAGCTAACAAAGATGTTTTTGACAATATGAGGAAAAATCCAAAAGTAAGATATGATGGAGCAAGATTCTCTTACAAGTCAAAACATGCTCTCCGGGACAAAAAAGAGCTGCTTTTCCTGATACGCAAATTTCCAGAGGGCATTGCTGTTATTGACTTAAAGGATTCGTACCCAACTGTAATGGAGGATTTACAGGCAGGGAGATTTGGCTGCTTTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAATGATCCTAAAGTGCCCATTAAGGTGGATGATGATTTAA 567 0.4021 MALQGKLDRFKKQQEKCQSTLSSIAASKSVSASAPNPLAPVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGARFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQAGRFGCFPTLIHRKTLPTLMILKCPLRWMMI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0192 188 Pfam TFA2 Winged helix domain 2 124 157 IPR040501 -
Mal6g0192 188 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 49 124 IPR003166 GO:0006367
Mal6g0192 188 Pfam TFIIE beta subunit core domain 63 122 IPR003166 GO:0006367
Mal6g0192 188 PANTHER BNAA02G21830D PROTEIN 1 159 - -
Mal6g0192 188 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 159 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0192 Mal-Chr6 2729854 2733096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0192 K03137 - gmx:100802433 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0192 6 2729854 2733096 Mal6g0192 6 2729854 2733096 ECH
Mal6g0192 6 2729854 2733096 Mal7g4894 7 117612582 117614862 PCT