Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0189 ATGTCCATCATCATGAAAACAAACCTCTCAATCTTCCTTCTCATAGCCTTAACCTCCATAGCTGCAGCACAAGCAGGAAGATTCAACATCACCAACAAATGCAACTACACCGTATGGGCCGCAGCCTTTCCTGGCGGCGGCATGAAACTTAACACCGGCGAATCATGGAACATGAACATAACAAACGGTACAAGTAACGCAAGAATCTGGGGTCGAACCAATTGCACTTTCGACAATTCAGGTCTCGGAAAGTGCCAAACAGGTGATTGTAACGGAACACTAGAGTGTCAAACATTTGGTACACCACCAAACACAATCATGGAATTTGCTTTGAACATGTATAACGACCTCGATTTCTACGATGTTTCACTTGTACAAGGTTTTAACATTCCAATTCAGTTAAAACCGTCTTTAAATTCTTGTGGTACCGCTAATTGTACCGCGGATATTAACGGAGAGTGTCCTACTCAACTTAAGGTACCAGGTGGTTGTAACAATCCTTGTACTACGTTTGGTACAACTGAATATTGTTGCAATTCTGATTCTGCTCGATCTGCAGCTACCAATGCCTCTGCCACATGTGGTCCAACTACTTATTCTAAGTTCTTTAAGGATAGGTGTCCTAATGCTTATAGTTACCCTAAAGATGATGCAACCAGCACATTCACTTGTATGGGAGGAACCACTTATGATGTTGTCTTCTGTCCTTAA 711 0.4219 MSIIMKTNLSIFLLIALTSIAAAQAGRFNITNKCNYTVWAAAFPGGGMKLNTGESWNMNITNGTSNARIWGRTNCTFDNSGLGKCQTGDCNGTLECQTFGTPPNTIMEFALNMYNDLDFYDVSLVQGFNIPIQLKPSLNSCGTANCTADINGECPTQLKVPGGCNNPCTTFGTTEYCCNSDSARSAATNASATCGPTTYSKFFKDRCPNAYSYPKDDATSTFTCMGGTTYDVVFCP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0189 236 ProSitePatterns Thaumatin family signature. 81 96 IPR017949 -
Mal6g0189 236 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 5 236 - -
Mal6g0189 236 PANTHER OS03G0233200 PROTEIN 5 236 IPR001938 -
Mal6g0189 236 Pfam Thaumatin family 32 236 IPR001938 -
Mal6g0189 236 ProSiteProfiles Thaumatin family profile. 25 236 IPR001938 -
Mal6g0189 236 SMART tha2 28 236 IPR001938 -
Mal6g0189 236 PIRSF PR5 1 236 IPR001938 -
Mal6g0189 236 Gene3D Thaumatin 26 236 IPR037176 -
Mal6g0189 236 PRINTS Pathogenesis-related protein signature 118 134 IPR001938 -
Mal6g0189 236 PRINTS Pathogenesis-related protein signature 81 110 IPR001938 -
Mal6g0189 236 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mal6g0189 236 PRINTS Pathogenesis-related protein signature 46 55 IPR001938 -
Mal6g0189 236 PRINTS Pathogenesis-related protein signature 226 235 IPR001938 -
Mal6g0189 236 PRINTS Pathogenesis-related protein signature 68 79 IPR001938 -
Mal6g0189 236 SUPERFAMILY Osmotin, thaumatin-like protein 27 236 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0189 Mal-Chr6 2669649 2670359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0189 11 236 Receptor kinase-like Gene Family AT5G38280 37.097 2.32e-46 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0189 - - gmx:100037479 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0189 6 2669649 2670359 Mal6g0189 6 2669649 2670359 ECH
Mal6g0189 6 2669649 2670359 Mal7g4891 7 117541499 117542171 PCT