Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0160 ATGATGAGAGGTTCGAAGCGTTTGGCTGTATCGGAACCTAACCGTGTTGATACCAACGAAACGCAATTTCGGAATAAAAGAATAATGGAAGGATCTCTCTTTGATGTCCATAGGGCTGAACCATCTCAACAACTGATGGTGGCAACACCCTCATTGGATATGAAACGAGCAGAGTCATCCCAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGCTGGGTTCAAACACAATTAAAGGATCATCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGATCATGCTACCGGCATTATGGAAAAATTTAGTGATGTTGTCAACTGGCTCAAAGCAAATGCCACCAAGGCAGAAAATTCTACTCCTGGTGCTGGTGCCGGTGCTTCTTTTGCTGGGAAAAAGTTTTTGCCTGAAGTAACAAACAAAGAAAATAAAAATTTTGGAGAAAAAACTGGATCTCCTCCTGTTAGTACTGCTCCAAATTTTGCTAGTCCATGGAGCCCTGGAATATTTTCAAACAGTCAAAATCAAAACCTGTTTACATTTGGAGGAAATCAAAGTTCAGCCCCCTCCAACTCCAATCAGAATGCTTCAGATGATGTGGATGCTGAAAACGAGGAGGAGCAGCCTAGTAGCCCATCAGTGAAGAAGGCAGAAGAGAAAGGGGTAGTAGTTGTGCATGAAGTGAAGTGCAAGCTTTATGTGAAGTCAAGTGACCCAACCGATAAAGATGTATGGAAAGATAGAGGAATGGGCAATCTGTCCATTAAATGCAAAGAGGGGGTCACTAAGGCTACCAAAGAGTCGAAACCGACAATTGTTGTTCGAAATGAGGTAGGGAAAATTCTTCTCAATGCCTTGTTGTATCCTGGAATCAAGACAAATCCACAGAAGAACTCTCTCGTTGCGATATTTCATACTGCGGGTAATGCTGATGGTGGTGGTGGAGATAATGATAGTGTTGTTGCACGTACATTTTTGATCCGGATGAAAACAGAAGACGATCGAAATAAACTGGCTTCGACTATTCAAGAGTATGCTCCAGCATCTTGA 1059 0.4249 MMRGSKRLAVSEPNRVDTNETQFRNKRIMEGSLFDVHRAEPSQQLMVATPSLDMKRAESSQQHVRALNTQFASWVQTQLKDHPDELWEDGVRDYLDHATGIMEKFSDVVNWLKANATKAENSTPGAGAGASFAGKKFLPEVTNKENKNFGEKTGSPPVSTAPNFASPWSPGIFSNSQNQNLFTFGGNQSSAPSNSNQNASDDVDAENEEEQPSSPSVKKAEEKGVVVVHEVKCKLYVKSSDPTDKDVWKDRGMGNLSIKCKEGVTKATKESKPTIVVRNEVGKILLNALLYPGIKTNPQKNSLVAIFHTAGNADGGGGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPAS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0160 352 SMART ranbd_3 209 348 IPR000156 GO:0046907
Mal6g0160 352 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 9 351 - -
Mal6g0160 352 MobiDBLite consensus disorder prediction 148 201 - -
Mal6g0160 352 ProSiteProfiles Ran binding domain type 1 profile. 219 352 IPR000156 GO:0046907
Mal6g0160 352 Pfam RanBP1 domain 217 347 IPR000156 GO:0046907
Mal6g0160 352 PANTHER RAN BINDING PROTEIN 9 351 IPR045255 -
Mal6g0160 352 MobiDBLite consensus disorder prediction 145 221 - -
Mal6g0160 352 Gene3D - 139 351 IPR011993 -
Mal6g0160 352 CDD RanBD_NUP50 220 349 - -
Mal6g0160 352 SUPERFAMILY PH domain-like 219 349 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0160 K14295 - gmx:100816975 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0160 6 2306041 2311340 Mal6g0160 6 2306041 2311340 ECH