Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0153 ATGGACACGGCGGCATCATCGTCTTCTTCCCCAACGGAAGATCAACAACATCACGATCTTCAACATCAACTTGAACAAGAACAACAAATTTCTTCACCAATCATCAAAGACTTTCTTCACAAAACCAAAATCATTCAATTTCTTGGTCGCACCACTCCGATCGTTCTTCAAAACGATAATGGACCTTGTCCTCTCCTCGCTATCTGTAACGTTCTTCTGCTACGAAACCAGTTAGGTTTGAGCCCAGATATTGCTGAAGTCTCACAGGAGAAGTTGCTTTCATTGGTTGCGGAGCGGTTGATTGATTCAAATAGTAATGTGAATAACAAAGATGCAGGCTATGTCGAAAATCAACAACAGAACATTGCCGATGCAATTGATCTGCTCCCTAGGCTTGCCACTGGAATTGATGTAAATCTAAAATTTACGAGAATAGATGATTTTGAATTCACTCCAGAGTGTGCCATATTTGATTTGCTGGACATTCCTTTGTATCATGGCTGGATAGTTGATCAGCAGGATTATGATACTGCAACTGCAATTGGATCGAAGTCCTATAATGCCCTTATGGGAGAGCTTGTTTCTCTTGAAACAAGGAACATTGAAAACCTACCAAAAAATAATCCAGAAGAAGATTGTGTTGATTTTGTGGCTGCAACAACTGCTGCCCTTGGAGTTCCTTCTCCCAGTCTTTCTAAAACCAGGTCTTTTGATGATTCTCCGCGTTCTGTTTCGGATCAGGCACCAAGAAAAGGTGATCTTGAAGAAGAAGAAGAGCTGTTAAGAGCCTTGAAGATGTCTGAAGTTGATTCTAAAGCTTCAATTAGTGATCCCGTTGTGGGACATGCAAATGGTAATGGGGGAGATGTTTCTTTTGGTATGGACGAAAATACGTGTGCCAAACAGGCTGCAACCGTTGATTCTGGAGTTGACTTAGGAAAGAACAGTGGTAAAGAAAGAAATGACTTTCATGAATCAGAATCCTCTGTACCTGATGATTGCATTGCTTCTAGGAAAGACTATAATGAACATACATCTTCTACATCTACACTGGGGGAAGAAGCTAATTCATCCTTAAAGAATGACGCCGTAAGTGACTTCCATCAATCAGCTTCTATGGGACCTGAAGAATCTATTGAACAAAATGACGTAGTTGAGAAGCATAACCTTGATACATTGGTTCAAAATGAGACTGCAGTCATCCTTTCACCTGAAAAGTATTCTGTTTCTTCTTTTGAGAGCTGTGCAGATGGCACTAGGGGCGATGAAAAAGTTCATAATCAATCCTCTCTTACAACTTCAGATGAATCTCAAGGACTTGATGCAACAGGAGTATCATGCTTATCTGCAAACCATACAACTTCTGATTCTTCTGGTCTTACTACTTCAGATGAATCTCAAGGACTTGATGCAACAGGAGTATCATGCTTATCTGCAAACCATACAACTTCTGATTCTTCTGGTATCAGATTTCATCAAACTGATGCTTCTGGAGCATTCCCTTCAACTGTTGATGGGAGTGAGCCCATGTATGAAGGAGAGGAATGTGTATTGGATACAAGAGCTGGAAAATTTGAGGATCGTGAACCTGTTTATGAAGGTGAGGCGGTGCTTCAGGAACAGGCTGACAAAAGCACCTTAGCTTCCCTTGATCTAAGAGCTAAGGAAGATATTACTCCAGAACAAGGAGAACTGGTCAAGAGTTTTTTGAGGAATAATGCCAGTCAGTTGACATTTTACGGGCTTTTCTGTCTACAAGATGGTCTTAAAGAGCGCGAGTTATGTGTGTTTTTCCGAAATAATCATTTCAGCACCATGTTTAAGTTTGAGGGTGAGCTCTATCTTCTAGCTACAGACCAAGGCTATATAAATCAGCCTGATCTGGTTTGGGAAAAACTGAATGAGGTCAATGGCGATACATTGTTTATGACTGGTAACTTCAAGGAATTCAAGGTAGAAAGCCATGAAAATAACACCACCTGGGATGAGAACAATGTTATGACCAGCACTGCTGACTATCTTGCCAGCATAGAAAGTGCAACGCAGGCAGGCTTAGATGTCAATTCTGATCTTCAACTAGCAATAGCCTTGCAACAACAAGAGTTTGAGCACCAGCCACCACGACAGAATCAACAAACACCATCTGTTAGTGGTAGCTCTAGACTGGTCACAGGTCCCCAGGTTCCAAGAAGCTCTGGAAGGAATCCATCTTCATCTCCCAGGCCTGATGCGAAATCTAAAGAAAAATGTATAGTGATGTGA 2262 0.4138 MDTAASSSSSPTEDQQHHDLQHQLEQEQQISSPIIKDFLHKTKIIQFLGRTTPIVLQNDNGPCPLLAICNVLLLRNQLGLSPDIAEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNLKFTRIDDFEFTPECAIFDLLDIPLYHGWIVDQQDYDTATAIGSKSYNALMGELVSLETRNIENLPKNNPEEDCVDFVAATTAALGVPSPSLSKTRSFDDSPRSVSDQAPRKGDLEEEEELLRALKMSEVDSKASISDPVVGHANGNGGDVSFGMDENTCAKQAATVDSGVDLGKNSGKERNDFHESESSVPDDCIASRKDYNEHTSSTSTLGEEANSSLKNDAVSDFHQSASMGPEESIEQNDVVEKHNLDTLVQNETAVILSPEKYSVSSFESCADGTRGDEKVHNQSSLTTSDESQGLDATGVSCLSANHTTSDSSGLTTSDESQGLDATGVSCLSANHTTSDSSGIRFHQTDASGAFPSTVDGSEPMYEGEECVLDTRAGKFEDREPVYEGEAVLQEQADKSTLASLDLRAKEDITPEQGELVKSFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHENNTTWDENNVMTSTADYLASIESATQAGLDVNSDLQLAIALQQQEFEHQPPRQNQQTPSVSGSSRLVTGPQVPRSSGRNPSSSPRPDAKSKEKCIVM* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0153 753 Pfam MINDY deubiquitinase 69 193 IPR033979 GO:0004843|GO:1990380
Mal6g0153 753 MobiDBLite consensus disorder prediction 309 335 - -
Mal6g0153 753 MobiDBLite consensus disorder prediction 483 510 - -
Mal6g0153 753 MobiDBLite consensus disorder prediction 425 441 - -
Mal6g0153 753 MobiDBLite consensus disorder prediction 228 243 - -
Mal6g0153 753 MobiDBLite consensus disorder prediction 413 441 - -
Mal6g0153 753 MobiDBLite consensus disorder prediction 313 335 - -
Mal6g0153 753 PANTHER NF-E2 INDUCIBLE PROTEIN 11 753 IPR007518 GO:0004843|GO:1990380
Mal6g0153 753 MobiDBLite consensus disorder prediction 702 753 - -
Mal6g0153 753 MobiDBLite consensus disorder prediction 483 501 - -
Mal6g0153 753 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 255 274 IPR003903 -
Mal6g0153 753 MobiDBLite consensus disorder prediction 1 26 - -
Mal6g0153 753 SMART uim 255 274 IPR003903 -
Mal6g0153 753 SMART uim 686 705 IPR003903 -
Mal6g0153 753 MobiDBLite consensus disorder prediction 702 740 - -
Mal6g0153 753 MobiDBLite consensus disorder prediction 228 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0153 K01309 - gmx:100808340 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0153 6 2190315 2195944 Mal6g0153 6 2190315 2195944 ECH