Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0144 ATGATCACCGATTCTTCCATGGCGATTCCTGCTTCCTCCAACGATTCCGTCTCTCTCGAAAGGAAATTCCTCAAGCACATTCGTGATAACGTTCACGGGAACATCTTTCTCGAGCCTATCTTTTTGAAGTTTGTTGATACAGAACAATTTCAAAGACTTCGTGATTTGAAGCAGCTTGGCCTAAGTCATATGGTTTACCCTGGGGCTGTCCATTCTCGTTTTGAGCATTCACTAGGTGTTTATTGCCTGGCTGGGAAAGCTATTGATATCATTAAAAAATACCAGGGCCCAGAGCTTGGCATTGAGCGATTTGATGTATTGGCAGTAAAACTTGCTGGACTACTGCATGATGTTGGTCATGGGCCATTCAGCCACACTTTTGAGCGCGGGTTCCTTCCCCTGGTTCTTAATGGCTCCACTTGGTCTCATGAGGAAATGTCTGAGAAAATGATAGATCACATTGTTGATCAACACAATATTGATTTGGATTCTCAACTCCTCAAAAAAGTGAAGGAAATGATCACTTCTAGCTCTGACCATCCTCCCCAAAGAGAAAAGAAGTTCTTATATGATATTGTTGCAAATGGTCGCAATGGAATTGACGTTGACAAGTTTGACTACATTGTTCGTGATTCACGTGCTTGTGGCCTGGGGTGCAACTTTCAGCCCGACAGATTGATGGAGACCATGCAAGTTATGGATGACGAAATTTGTTATCGCGCTACAGATTATCTGACAATTCACAAGTTATTTGCAACCCGAGCTGATTTGCATAGAACAGTCTATACACATGCAAAAGTAAAGGCAATCGAGTTGATGGTTCTCGATGCACTGGTGAAAGCAGATCCATATCTTCACATTGCATCCTCAATTCATCAACCATCTGACTTTTGGAAGTTAGACGACTCGGTTCTCAAAACAATTGAATCTTCTTCCAAGCAAGAGCTGAAGGAATCCAGAGACTTGATTATACGCATTCACAGAAGGCAATTGTACCAGTTATGCAATGAATTTTCTGTTCCAAAGGAAAAACTAGACAACTTCAAAAGCATCACACCCCAAGACATTGTTTGTTCCCAGATCAATGGCACCAATTTGAAAGAAGATGATGTCGCTGTGACCAATGTTAAAATTGATTTAACACGTGGAATGGAAAACCCTCTTGAAAGAATTAAATTTTTCAAGGACTACGAGAGTAAAGAAAAATTTCCCATCCAAAATGAGCGAATCAGTCATTTGTTGCCAGCATTTTACGAAGACATCATAGTGAGAGTGTACAGCAAGAAGCCCGAACTGGTGGAAGCTGTTTCTGCTGCCTTCGAAAACTATCAGCTCAAGACATTTGGAAGGAAAGCAGAACTACACGAAACTCCTAAGAAGAAACAGCGTCTTAACCCTACTGACTTTGAACATGTAGATATCTACTAG 1428 0.4132 MITDSSMAIPASSNDSVSLERKFLKHIRDNVHGNIFLEPIFLKFVDTEQFQRLRDLKQLGLSHMVYPGAVHSRFEHSLGVYCLAGKAIDIIKKYQGPELGIERFDVLAVKLAGLLHDVGHGPFSHTFERGFLPLVLNGSTWSHEEMSEKMIDHIVDQHNIDLDSQLLKKVKEMITSSSDHPPQREKKFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFQPDRLMETMQVMDDEICYRATDYLTIHKLFATRADLHRTVYTHAKVKAIELMVLDALVKADPYLHIASSIHQPSDFWKLDDSVLKTIESSSKQELKESRDLIIRIHRRQLYQLCNEFSVPKEKLDNFKSITPQDIVCSQINGTNLKEDDVAVTNVKIDLTRGMENPLERIKFFKDYESKEKFPIQNERISHLLPAFYEDIIVRVYSKKPELVEAVSAAFENYQLKTFGRKAELHETPKKKQRLNPTDFEHVDIY* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0144 475 Pfam HD domain 73 209 IPR006674 -
Mal6g0144 475 ProSiteProfiles HD domain profile. 73 208 IPR006674 -
Mal6g0144 475 Pfam HD associated region 224 334 IPR045509 -
Mal6g0144 475 Gene3D Hypothetical protein af1432 23 330 - -
Mal6g0144 475 SMART hd_13 69 217 IPR003607 -
Mal6g0144 475 PANTHER DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE 7 463 - -
Mal6g0144 475 CDD HDc 71 216 IPR003607 -
Mal6g0144 475 SUPERFAMILY HD-domain/PDEase-like 21 449 - -
Mal6g0144 475 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 7 463 - -
Mal6g0144 475 Gene3D - 331 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0144 Mal-Chr6 2062939 2068471 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0144 K22544 - gmx:100796869 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0144 6 2062939 2068471 Mal6g0144 6 2062939 2068471 ECH