LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal6g0133	ATGGAATTCCATAAATCCTTTTCAAATCATAAAGTAACTAAGTCTTCTCCTTCCCCTGCACTCTGTTGTGTGGAGACAGTGCAAAAATATGAACAAAATTCTCATATTACAGCTTTTAATTCAGGAGATGGATCCACAAATTCAGATAATCAATCTTCTTCATCAAAGACCGTGCGCGATGTACATATTTCAATGCGGTTGATGGAGGATTTTCTTGATCTTGCTAAAGAAAATACAGAGAAGGATCTGGAAACATGTGGTATACTTGGTGCCCTGCTTTGTAATGCCACAAATGAGGAGGAAGTTTTCACAATTCTAAATGAAAGATCCCTTTATCCTGTTGGATGGATCCATACACACCCTTCTCAAAGTTGTTTCATGTCATCGGTCGATCTGCACACTCAATATTCCTACCAGGCGATGATTCCTGAGGCATTTGCCATTGTATTGGCACCAACTGATACCTCAAGGAGCTGCGGACTCTTTCGCCTAACCGAACCTGATGGGATGAGTATTCTGAAAAATTGTCCGGAGAGGGGATTTCATCCACACAAAGAACCTGATAATGGAAATCCTGTGTATGAGCACTGCTCTAATGTGTACAAAAATTCCAATCTAAGGTTTGAAATATTTGATTTACGCTAA	645	0.3969	MEFHKSFSNHKVTKSSPSPALCCVETVQKYEQNSHITAFNSGDGSTNSDNQSSSSKTVRDVHISMRLMEDFLDLAKENTEKDLETCGILGALLCNATNEEEVFTILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQAMIPEAFAIVLAPTDTSRSCGLFRLTEPDGMSILKNCPERGFHPHKEPDNGNPVYEHCSNVYKNSNLRFEIFDLR*	215

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal6g0133	214	Gene3D	Cytidine Deaminase, domain 2	39	92	-	-
	Mal6g0133	214	Gene3D	Cytidine Deaminase, domain 2	93	214	-	-
	Mal6g0133	214	ProSiteProfiles	MPN domain profile.	37	170	IPR037518	-
	Mal6g0133	214	CDD	MPN_AMSH_like	59	214	IPR044098	GO:0016579\|GO:0061578\|GO:0070536\|GO:0140492
	Mal6g0133	214	PANTHER	FI19924P1	6	93	-	-
	Mal6g0133	214	PANTHER	FI19924P1	94	214	-	-
	Mal6g0133	214	SUPERFAMILY	JAB1/MPN domain	61	168	-	-
	Mal6g0133	214	SMART	pad1_6	60	167	IPR000555	GO:0005515\|GO:0008233\|GO:0008237
	Mal6g0133	214	MobiDBLite	consensus disorder prediction	37	58	-	-
	Mal6g0133	214	PANTHER	AMSH-LIKE PROTEASE	6	93	-	-
	Mal6g0133	214	PANTHER	AMSH-LIKE PROTEASE	94	214	-	-
	Mal6g0133	214	Pfam	JAB1/Mov34/MPN/PAD-1 ubiquitin protease	97	144	IPR000555	GO:0005515\|GO:0008233\|GO:0008237

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal6g0133	Mal-Chr6	1894565	1897241	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal6g0133	K11866		-	gmx:100807282	332.413

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal6g0133	6	1894565	1897241	Mal6g0133	6	1894565	1897241	ECH