Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0112 ATGCAAGAATTAGAGCAATGGAAGGAACAGGCTTCTCACCTGTGGAATGTGGCAAATGATTATCTTCGCGAGGTTCCTCCCAATCAGCTCTATGTCGCTGCTGCTATTGCTGCTTTCACAACCCTGCTTCTTTTCTTCCTGCGGTTTTTGAAGCACACCAAGTCTAACACCATTGTGTTGACGGGACTTAGTGGTAGCGGGAAAACCGTTATCTTCTATCAGCTTAGGGATGGCTCTACTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGACACTTTTATTCTTCACGGTGAAACAGAAAAGAAGGGAAAGATAAAGCCAGTTCATATTGTTGATGTTCCCGGACATTCTCGTGTTCGACCCAAATTGGATGACTACTTGCCTCAAGCAGCTGGCGTAGTCTTTGTTGTTGATGCTTTGGACTTCTTACCAAATTGCCGTGCTGCCTCAGAGTACCTATATGATCTGTTGACTAAGGGAAGTGTTGTGAAGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACCGACAAAGTCACTGCTCACACCAAAGAATTTATCCGCAGACAAATTGAGAAAGAAATCGACAAGTTACGGGCATCAAGGAGTGCAGTTTCAGACGCTGACGTAACTAATGAGTTTACTTTGGGGGTACCCGGTGAGCCATTTTCCTTTACACAGTGTGCTAACAAAGTTACAACCGCAGATGCTTCTGGTTTAACTGGAGAGATATCTCAGCTAGAAGAGTTTATCAGAGAATATGTGAAGCCATAG 780 0.4372 MQELEQWKEQASHLWNVANDYLREVPPNQLYVAAAIAAFTTLLLFFLRFLKHTKSNTIVLTGLSGSGKTVIFYQLRDGSTHQGTVTSMEPNEDTFILHGETEKKGKIKPVHIVDVPGHSRVRPKLDDYLPQAAGVVFVVDALDFLPNCRAASEYLYDLLTKGSVVKKKIPLLILCNKTDKVTAHTKEFIRRQIEKEIDKLRASRSAVSDADVTNEFTLGVPGEPFSFTQCANKVTTADASGLTGEISQLEEFIREYVKP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0112 259 Coils Coil 190 210 - -
Mal6g0112 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
Mal6g0112 259 PANTHER TRANSFERRIN 4 259 - -
Mal6g0112 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 205 IPR027417 -
Mal6g0112 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Mal6g0112 259 Gene3D - 50 257 IPR027417 -
Mal6g0112 259 CDD SR_beta 56 256 IPR019009 -
Mal6g0112 259 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 259 IPR019009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0112 Mal-Chr6 1676454 1678769 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0112 1 259 Miscellaneous Gene Families AT5G05670 69.231 1.17e-133 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0112 K12272 - gmx:100800572 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0112 6 1676454 1678769 Mal6g0112 6 1676454 1678769 ECH