Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0102 ATGAAGAGAAACAAAAGTTTTTCTCAACTCTTTATTATGTCCTTGTTGGTGCTTATCTTTGTCACCTTCTCTGTGGATGCAAGGAAGACTAACATGAAGAAAAAACTTCACAAACATCACAAAGAATCACATCCTCTTCCTCATTATGACCCCCATCCAATTCAACCAAACACTTTTGATATTATGTCTTTTGGTGCAAAGGGCAATGGAGTTTTTGATGATTCAGAGGCACTTCTAGCTGCATGGAAATGTGCATGCAAAGTTTCTGGTGCAACAATAAAAGTTCCAGCAAAATTCAAATTCCTCATTAAGTCCATTACTTTACAAGGCCCTTGTATGCCTGACCTTACCCTTCAGATAGATGGAACAATATTGGCTCCTCCTGAAGTATCATCATGGCCAAAGTCCAGTTTGTTTCAGTGGATAAATTTTAAATGGGTGCAGAACTTCACTATCAAAGGCTATGGCACTATTGATGGTCAAGGCTATAATTGGTGGACCTCCTCAGAACTTTATGATATAGAGAAAACTCACTCTAAACAAATTCCAAGCATGAAGCCAACTGCTATAAGATTCTATTCTAGCAACCTTGTAAAGATTAGAGATATCAAAATAAAAAACAGTCCACTCTGCCATCTAAAATTTGACAACTCAAAGGGAATCAAAGTTGACAATATTACAATATCTTCCCCTGCAAATAGCCCAAACACTGATGGCATTCATTTGCAAAACACACAGGATGTAGAAATTCAACATTCTGATATTGGCACTGGAGATGACTGTATGTCCATCCAAACCGGTTGCTCTAACATTCATGTCCACCATATTAAATGTGGCCCTGGTCATGGCATAAGTTTAGGAGGATTAGGAAAAGACAAGAGTGTGGCATGCGTCTCTGACATCATTGTTGAAGATATTTCAATGAAAAATACTCTATATGGAGCAAGGATCAAAACATGGCAGGGAGGCAATGGTATGGTTAAAAATGTATCATTTTCAAGAATCAAGGTCTATGATGTTATGTATCCAGTAATGATAGACCAATACTATTGTGACAAACAAATTTGCAAGAACCAAACAGGAACAGTGATAATTTCTGGTGTTAAATTTGATCAAATAAGTGGAAGTTATTTAGTGCAGCCTGTCCACCTAGCTTGCAGCAGTTCCATACCATGCACAGACGTTGATTTAACTGACATTCAGTTAAAACCTTCCCTTAAATATAGAGGTATGCAACAAGCTATGTGTTGGAACTCTTATGGAAAATCACAAGGTCAATTAGTACCTTCAAGTATTGATTATTGTTTGAGAAGTGGTGGTGGATTAATTAAGAGGATAGCAAAGTCACATGATAGTGTATGTTATAAATTGTTATAG 1377 0.3696 MKRNKSFSQLFIMSLLVLIFVTFSVDARKTNMKKKLHKHHKESHPLPHYDPHPIQPNTFDIMSFGAKGNGVFDDSEALLAAWKCACKVSGATIKVPAKFKFLIKSITLQGPCMPDLTLQIDGTILAPPEVSSWPKSSLFQWINFKWVQNFTIKGYGTIDGQGYNWWTSSELYDIEKTHSKQIPSMKPTAIRFYSSNLVKIRDIKIKNSPLCHLKFDNSKGIKVDNITISSPANSPNTDGIHLQNTQDVEIQHSDIGTGDDCMSIQTGCSNIHVHHIKCGPGHGISLGGLGKDKSVACVSDIIVEDISMKNTLYGARIKTWQGGNGMVKNVSFSRIKVYDVMYPVMIDQYYCDKQICKNQTGTVIISGVKFDQISGSYLVQPVHLACSSSIPCTDVDLTDIQLKPSLKYRGMQQAMCWNSYGKSQGQLVPSSIDYCLRSGGGLIKRIAKSHDSVCYKLL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0102 458 Pfam Glycosyl hydrolases family 28 91 405 IPR000743 GO:0004650|GO:0005975
Mal6g0102 458 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 15 443 - -
Mal6g0102 458 SUPERFAMILY Pectin lyase-like 53 432 IPR011050 -
Mal6g0102 458 PANTHER - 15 443 - -
Mal6g0102 458 Gene3D - 51 438 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0102 Mal-Chr6 1491153 1494308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0102 5 454 Glycoside Hydrolase AT3G26610 59.701 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0102 K01213 - gmx:100803027 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0102 6 1491153 1494308 Mal6g0102 6 1491153 1494308 ECH