Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5250 ATGGGTGTTTCTATGAGAGATTTGGATCCAGCTCTCAAGGGAGCTGGACAAAAAGATGGACTTGAAATATGGCGTATTGAGAATTTTAATCCAGTTCCCATCCCTCAGTCTTCTTATGGAAAGTTTTTCACTGGAGACTCATATGTGATCTTGAAGACAACGGCATCAAAAAGTGGTGCTCTGCGCCATGATATTCATTATTGGCTTGGCAAAGACACCAGTCAGGATGAAGCTGGTGCCGCAGCCATCAAAACAGTTGAGTTGGATGCAGTTCTAGGAGGACGTGCTGTTCAGTACCGTGAAGTGCAGGGTCATGAAACACAGAAGTTCCTGTCATATTTCAAACCATGCATTATACCGCAAGAAGGTGGAGCTGCCTCTGGTTTTAAGCATGTTGAAGCTGAAGAACATAAGACACGGTTGTTTGTATGCAAAGGGAAACATGTTGTAAATGTCAAAGAGGTTCCTTTTGCTCGATCTTCGCTCAACCATGATGATATTTTTATCCTGGATACTGAGTCAAAAGTCTTCCAATTTAATGGTTCCAAATCATGTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTTCAATATATTAAGGATACCTACCATGATGGGAAATGTGAAGTGGCTTCTATTGAGGATGGAAAGTTGATGGCTGACTCTGAATCTGGAGAGTTTTGGGGTTTGTTTGGGGGCTTTGCTCCTCTTCCACGTAAAACAGCCAGTGATGATGATAAGACAATTGAATCTCATCCTCCGAAGTTGCTTTGTGTGGAAAAGGGGAAGGCAGAGCCTATTGAAACTGATTCTTTGACAAAGGAATTACTGGACACCAACAAATGCTATATTTTAGATTGTGGATTGGAGGTGTTTGTTTGGATGGGAAGAAACACTTCTCTCGATGAAAGGAAAAGCACAAGTGGAGCTACAGATGAACTAGTTAGTAGCACCAATCGACCAAAATCCCAGATAGTCCGCGTAATTGAAGGATTTGAAACAGTGATGTTCAGATCTAAATTCGATTCTTGGCCTCAGATATCTAATGAAACAATGTCTGAAGATGGTCGTGGCAAGGTAGCTGCGCTTCTTAAACGTCAAGGATTGGATGTCAAGGGACTCTTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCTACATCGATTGCACGGGACATTTACAAGTTTGGCGTGTGAATGGTCAACAAAAAAATCTTCTTGCAGCCACTGACCAGTCAAAGTTTTATAGCGGAGATTGTTACATCTTTCAGTATTCATATCCTGGAGAAGACAGGGAGGAGCATCTTATAGGAACATGGATCGGAAAGAACAGCGTAGAGGATGAAAGAGCTTCAGCTCTTTCACTAGCAAGCAAAATGGTCGAGTCAATGAAGTTTATTCCGTCCATGGCTCGTATTTATGAAGGCAGTGAAACAATTCAATTTTATTCCATCCTCCAAAGCTTGATTGTTTTTAAGGGCGGACTTAGCGATGCATATAAGAATTACATTGTGGAGAAGGAAATTTCAGATGAGACATACAGGGAAGATGGTGTTGCATTATTCCGCATCCAGGGCTCTGGACCGGAGAATATGCAAGCTATACAAGTTGACCCAGCTGCTTCCTCCTTGAATTCCTCTTATTGCTACATACTTCAAAGTGACTCCATTGTTTTTACTTGGTATGGAAATCTTACAACTTCAGATGACCAAGAACTCGCTGAGAGAATGCTGGATTTAATTAAGCCGGATTTACAATGCAAACCACAAAAGGAAGGTGCAGAATCTGAACAGTTTTGGGAATTGTTAGGAGGAAAAACAGAATATCCCAGTCAAAAGATTGTGAGGGAAGCTGAAAATGATCCTCACCTATTTTCTTGCCATTTCTCAGAAGTTGTGTTGATCCCATGGTATGAAGGAAATGTTTATTTACAGGTGATAGAGATACACAACTTTTCCCAGGATGATTTGACGACAGAAGATATTTTTGTCTTGGATTGTCACTCTGAAATCTTTGTGTGGGTTGGCCAGCAGGTTGACCCCAAAAGTAGATTGCAGGCTCTACCAATTGGTGAGAAATTTCTTGAGCAAGATTTTCTTCTAGAAACAATATCTCGTTTTGCTCCAATGTATATTGTCATGGAAGGCAGCGAGCCGCCTTTCTTCACTCGCTTCTTTAAATGGGATTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTGCAATCATGAAAAATGGGGGCACTCCACCTTTGGTTAAACCCAAAAGAAGAGCATCTGTATCTTATGGGGGAAGGTCTGGTGGTTTGCCAGAGAAATCCCAACGCTCTCGCAGTATGTCTGTTAGTCCTGATCGTGCTCGTGTGAGAGGACGATCTCCAGCCTTCAATGCATTGGCAGCCACTTTCGAGAACACAAATGTTAGAAACCTTTCAACTCCACCTCCAATGATTAGAAAACTGTACCCAAAATCTATGACACCAGATTCAGCAACACTGGCACCTAAATCATCAGCCATATCTCATCTTACTTCTACTTTTGAACCACCATCAGCACGAGAAAATTTGATTCCTCGGTCACTTAAAGGGAGCACAGATACTTCCAAATCGAACCCTGAGACAAATAATGACAACGAGAATTCTACGAGCAGCAGAGAAGAATCTCATACTATACAGGTAGATGTGAACGAGGGTGAAGCTGAAGATAATGAAAATCTTCCAGTTTACCCATATGAAAGTGTTAACACAGCTTCTACAGACCCTATGCCAGACATTGACGTGACTAAACGAGAGGCTTATCTGTCACCTGATGAATTCAAAGAGAGACTGGGGATGACTAGGAATGAATTTTACAAGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCTGTTCAGTTGTTCTGA 2916 0.416 MGVSMRDLDPALKGAGQKDGLEIWRIENFNPVPIPQSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAVLGGRAVQYREVQGHETQKFLSYFKPCIIPQEGGAASGFKHVEAEEHKTRLFVCKGKHVVNVKEVPFARSSLNHDDIFILDTESKVFQFNGSKSCIQERAKALEVVQYIKDTYHDGKCEVASIEDGKLMADSESGEFWGLFGGFAPLPRKTASDDDKTIESHPPKLLCVEKGKAEPIETDSLTKELLDTNKCYILDCGLEVFVWMGRNTSLDERKSTSGATDELVSSTNRPKSQIVRVIEGFETVMFRSKFDSWPQISNETMSEDGRGKVAALLKRQGLDVKGLLKADPVKEEPQPYIDCTGHLQVWRVNGQQKNLLAATDQSKFYSGDCYIFQYSYPGEDREEHLIGTWIGKNSVEDERASALSLASKMVESMKFIPSMARIYEGSETIQFYSILQSLIVFKGGLSDAYKNYIVEKEISDETYREDGVALFRIQGSGPENMQAIQVDPAASSLNSSYCYILQSDSIVFTWYGNLTTSDDQELAERMLDLIKPDLQCKPQKEGAESEQFWELLGGKTEYPSQKIVREAENDPHLFSCHFSEVVLIPWYEGNVYLQVIEIHNFSQDDLTTEDIFVLDCHSEIFVWVGQQVDPKSRLQALPIGEKFLEQDFLLETISRFAPMYIVMEGSEPPFFTRFFKWDSAKSAMLGNSFQRKLAIMKNGGTPPLVKPKRRASVSYGGRSGGLPEKSQRSRSMSVSPDRARVRGRSPAFNALAATFENTNVRNLSTPPPMIRKLYPKSMTPDSATLAPKSSAISHLTSTFEPPSARENLIPRSLKGSTDTSKSNPETNNDNENSTSSREESHTIQVDVNEGEAEDNENLPVYPYESVNTASTDPMPDIDVTKREAYLSPDEFKERLGMTRNEFYKLPKWKQNKLKMAVQLF* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5250 971 MobiDBLite consensus disorder prediction 750 794 - -
Mal5g5250 971 SUPERFAMILY Actin depolymerizing proteins 10 147 - -
Mal5g5250 971 SMART VHP_1 936 971 IPR003128 GO:0003779|GO:0007010
Mal5g5250 971 CDD gelsolin_S5_like 517 608 - -
Mal5g5250 971 ProSiteProfiles Headpiece (HP) domain profile. 906 971 IPR003128 GO:0003779|GO:0007010
Mal5g5250 971 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 255 427 IPR036180 -
Mal5g5250 971 MobiDBLite consensus disorder prediction 883 899 - -
Mal5g5250 971 PANTHER VILLIN-4 1 971 - -
Mal5g5250 971 PANTHER VILLIN 1 971 IPR007122 GO:0051015
Mal5g5250 971 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Mal5g5250 971 Gene3D Villin headpiece domain 909 971 IPR036886 GO:0003779|GO:0007010
Mal5g5250 971 SUPERFAMILY Actin depolymerizing proteins 129 246 - -
Mal5g5250 971 Gene3D Severin 388 502 IPR029006 -
Mal5g5250 971 Gene3D Severin 133 246 IPR029006 -
Mal5g5250 971 MobiDBLite consensus disorder prediction 861 882 - -
Mal5g5250 971 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Mal5g5250 971 PRINTS Gelsolin family signature 654 676 IPR007122 GO:0051015
Mal5g5250 971 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Mal5g5250 971 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Mal5g5250 971 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Mal5g5250 971 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Mal5g5250 971 Gene3D Severin 517 612 IPR029006 -
Mal5g5250 971 SUPERFAMILY Actin depolymerizing proteins 595 727 - -
Mal5g5250 971 Pfam Villin headpiece domain 936 971 IPR003128 GO:0003779|GO:0007010
Mal5g5250 971 Pfam Gelsolin repeat 269 337 IPR007123 -
Mal5g5250 971 Pfam Gelsolin repeat 648 686 IPR007123 -
Mal5g5250 971 Pfam Gelsolin repeat 28 111 IPR007123 -
Mal5g5250 971 Pfam Gelsolin repeat 149 216 IPR007123 -
Mal5g5250 971 CDD gelsolin_S3_like 254 343 - -
Mal5g5250 971 MobiDBLite consensus disorder prediction 810 909 - -
Mal5g5250 971 SMART VILL_6 633 729 IPR007122 GO:0051015
Mal5g5250 971 SMART VILL_6 392 489 IPR007122 GO:0051015
Mal5g5250 971 SMART VILL_6 137 234 IPR007122 GO:0051015
Mal5g5250 971 SMART VILL_6 519 606 IPR007122 GO:0051015
Mal5g5250 971 SMART VILL_6 19 117 IPR007122 GO:0051015
Mal5g5250 971 SMART VILL_6 254 344 IPR007122 GO:0051015
Mal5g5250 971 CDD gelsolin_S4_like 386 485 - -
Mal5g5250 971 Gene3D Severin 7 132 IPR029006 -
Mal5g5250 971 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Mal5g5250 971 CDD gelsolin_S1_like 12 124 - -
Mal5g5250 971 Gene3D Severin 247 357 IPR029006 -
Mal5g5250 971 CDD gelsolin_S2_like 138 232 - -
Mal5g5250 971 CDD gelsolin_S6_like 621 730 - -
Mal5g5250 971 MobiDBLite consensus disorder prediction 833 854 - -
Mal5g5250 971 Gene3D Severin 613 744 IPR029006 -
Mal5g5250 971 SUPERFAMILY VHP, Villin headpiece domain 895 971 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5250 Mal-Chr5 126529827 126537707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5250 - - gmx:100807762 1623.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5250 5 126529827 126537707 Mal5g5250 5 126529827 126537707 ECH
Mal4g3463 4 101947300 101957882 Mal5g5250 5 126529827 126537707 PCT