Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5239 ATGGGTGCTTGTTATTCTTGCAACACATCCTCTTCCTCTATATTCAAAAATAATATCAGAGTGATTCATCTCAATGGTTTTGTAGAAGATTTTGATCAACCAATTTCAGCAAGCCAAGTTATTGGAAATCCACCAAACTACTTTGTTTGTACTTCAATTCAGCTTCTTTCCTCATCATCCTACAAACCATTGAAAGGAGATAGTCAACTCCAACCTGGTCAACTATATTTCATGCTACCATACTCAATACTTCAAGATGGTTTTTCTCCTGTGGACTTGGCTTGCTTAGCAAAGAAGCTCACGGCAAAAGCAAAATCCAAAACCAAGCAGCCATGTGATTACAATAAGTCTCCAACAGCTATTTCTTTACTGAGCCAAACAATTTCTCGGAATTCTCCTTCAAGGAGTCTTTGTAGAGTTGGTGCGGAAGAGAAAATTGGTATGAGTATGATGAGTGGTGGAAGAAGCCCTTGTAGAATGCAATCTTGGAAACCTATCTTGGATACTATTACAGAGAAACCATTTAACAGAAGAAGTGAATCAGATTTGCAAGAAAAAATTATTAATGTTTAG 573 0.37 MGACYSCNTSSSSIFKNNIRVIHLNGFVEDFDQPISASQVIGNPPNYFVCTSIQLLSSSSYKPLKGDSQLQPGQLYFMLPYSILQDGFSPVDLACLAKKLTAKAKSKTKQPCDYNKSPTAISLLSQTISRNSPSRSLCRVGAEEKIGMSMMSGGRSPCRMQSWKPILDTITEKPFNRRSESDLQEKIINV* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5239 190 Pfam PADRE domain 1 172 IPR025322 -
Mal5g5239 190 PANTHER OS06G0700300 PROTEIN 1 184 - -
Mal5g5239 190 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5239 Mal-Chr5 126395943 126396515 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5239 - - cam:101506348 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5239 5 126395943 126396515 Mal5g5239 5 126395943 126396515 ECH
Mal5g5239 5 126395943 126396515 Mal4g3424 4 100751961 100752512 PCT