Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5232 ATGCCACCGGCTCTGGTGGATCCGCCATTGTCAAAAACATCATCGGTGCCGTCTTTAATCTCCGGCACCATTTCTGAAGGACTGGCGCCGGAGAATCGGTTATTCGAGGATCTTAGAGGTTTGCAGTGGCGTATAAATCTTGGGGTTTTGCCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACTTTAATTGATGATCTTCGTCGTGCCACCGCGAATTCACGAAGGAGCTATGCCAGTTTGAGAGGGCGCCTCCTGGTTGATCCGCACATTACAAAGGATGGAAGTAGTTCACCTAATCTTGTCATGGACAATCCACTTTCACAAAATCCAAACAGTACATGGGGTCGCTTTTTTCACAATGCAGAGCTGGAGAGGATGGTAGATCAGGATTTATCACGTTTATACCCAGAACATGGCAACTATTTCCAGACAAAAGGGTGCCAAGGCATATTGAGACGAATTTTATTATTATGGTGTCTTAGACACCCCGAGTGTGGTTATAGACAAGGAATGCACGAGTTACTCGCACCCTTGCTTTATGTTCTCCAAGTTGATGTGGAACGCCTTACAGAAGTTCGAAAACTTTATGAAGACCACTTCACAGACAGATTTGATGGTCTCTTTTGTCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAGAAAATCTTCAGACTTGATGAATGATGAAATTGGTTCCCACGGAAAAGGAATGAAAATCAAGAGTCTTGATGAGCTTGATCCTAAGATACAGACCATTGTATTGTTAAGTGACGCTTATGGGGTTGAAGGTGAACTGGGCATTGTTTTATCTGAGAAATTTATCGAGCATGATGCTTACTGTATGTTTGAAGCTTTAATGAACGGGGCTCACGGTTCAGTTGCAATGGCCGATTTTTTCTCTTATTCTCCTGTTGCTGGGTCCCATACTGGTTTGCCACCTGTAATTGAAGCTTCTGCTGCATTGTATCATTTATTGTCTCATGTGGATTCATCTCTGTATAGCCATCTTGTTGATCTTGGGGTTGAACCACAGTACTTTGCGCTCCGCTGGTTGAGAGTTTTATTTGGACGGGAATTTTCGCTTGACAACCTCTTGATCGTCTGGGATGAAATCTTTTTATCAGATAATAGTAAAATGGAAAAGCATGCAGAGGACAACACAGACACTGGTTTTAGGATCTTTCATTCATCTCGCGGAGCATTTATCTCAGCTATTGCTGTGGCAATGTTACTTCATATAAGATCTTCACTACTTGCAACTGAAAATCCTACGACCTGTCTCCAGAGATTATTAAGCTTCCCTGAGAACACAAACATTAAAAAACTAATAGAGAAAGCTAAATCCTTGCAGACTCTTGCATTAAGTACTGAAATTTCATCCTCGACACCTGCGCTTGTAGAATATAACAAGGGTAAATCGGTTATTACAAGATCTGTTACCATTGCATGTGAATCAGGTTCACCAAAAACTCCTAATTTATTGCCTGATAATAGCTACTGGGAAGAAAAGTGGAGAGTTGTCCACAGTGCTGAAGAACTTAAACAAGATGGAGTAGAAAAGCAGGTTCCATCTCAGAAAAAGAGATGGACAGAAAAGGTGAAGTTAAGTTTAAAAAGAACAGAATCTGAACCATCTTCATCAACAATTAAGAGTGGTAAAAAGGAATCTAAGACATCTATTAAGCGCAGTTTGTTAGAAGATCTATCCAAGGAACTTGGGTCAGAAGAAGATACAGAAAATCTCGGCTGTCACGAAACCTCATGCCAGCAGGATAATCATTCTCTAGCAGTTGAGGTGGAGCAACAAGATGATGGCTCTGACGTAAGCAACAGTTACGGTGCTGATGATAGATGTCTAAGTAGAAACACCGGCAGCGAGGAAAACTCATTTAACCAAGCTAGTCCTCCTAATGAGATCAAAGATCATGAAAATGTCTCACAGAAAAGTAGTGTTGGGTCTAATTTATCCCTTGATGAAATTAATGAAATTTCACATAGCAGTCCCATCGATTCACCTCTTCCAATATCTGATCATCCTGAGAATAACCTATCTCCGGTGGCAGGGCGCAATAATGATTCCACAGGAAATTCGGCCACACTTTCTAGGGATATAAAACTGAATAAATTCCAATGGCTTTGGAAGTTTGGCCGTAATAATGGTGAATTGATGTCTGAGAAAAGAGGACGTGCTTCTGAGGCTGTAAAACCGACCAACAATTGTAATGATCGAAGTAATACAGCTTCCTCTTCTACAGCTGGTGAGCATTGCAGTTCTGTTAATTTTAACGGAGATTCTGCAGACCAGAATGTGATGGGAACTTTGAAGAATATTGGGCAGTCCATGCTTGAGCATATTCAGGTGATTGAGTGTGCTTTCCAACAAGAGTGTGGTCAGGGAACTTCATTGGATAATATGTCTAAAAATGATCTGGTTGGCAAAGGGCAGGTTACTGCCGTGTCAGCTCTCAAGGAGCTCCGCAAAATTAGCAACCTTTTGTCTGAGATGTGA 2523 0.4126 MPPALVDPPLSKTSSVPSLISGTISEGLAPENRLFEDLRGLQWRINLGVLPSSSSSSSSSSSSSTLIDDLRRATANSRRSYASLRGRLLVDPHITKDGSSSPNLVMDNPLSQNPNSTWGRFFHNAELERMVDQDLSRLYPEHGNYFQTKGCQGILRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDVERLTEVRKLYEDHFTDRFDGLFCQENDLSYSFDFRKSSDLMNDEIGSHGKGMKIKSLDELDPKIQTIVLLSDAYGVEGELGIVLSEKFIEHDAYCMFEALMNGAHGSVAMADFFSYSPVAGSHTGLPPVIEASAALYHLLSHVDSSLYSHLVDLGVEPQYFALRWLRVLFGREFSLDNLLIVWDEIFLSDNSKMEKHAEDNTDTGFRIFHSSRGAFISAIAVAMLLHIRSSLLATENPTTCLQRLLSFPENTNIKKLIEKAKSLQTLALSTEISSSTPALVEYNKGKSVITRSVTIACESGSPKTPNLLPDNSYWEEKWRVVHSAEELKQDGVEKQVPSQKKRWTEKVKLSLKRTESEPSSSTIKSGKKESKTSIKRSLLEDLSKELGSEEDTENLGCHETSCQQDNHSLAVEVEQQDDGSDVSNSYGADDRCLSRNTGSEENSFNQASPPNEIKDHENVSQKSSVGSNLSLDEINEISHSSPIDSPLPISDHPENNLSPVAGRNNDSTGNSATLSRDIKLNKFQWLWKFGRNNGELMSEKRGRASEAVKPTNNCNDRSNTASSSTAGEHCSSVNFNGDSADQNVMGTLKNIGQSMLEHIQVIECAFQQECGQGTSLDNMSKNDLVGKGQVTAVSALKELRKISNLLSEM* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5232 840 MobiDBLite consensus disorder prediction 538 566 - -
Mal5g5232 840 MobiDBLite consensus disorder prediction 739 759 - -
Mal5g5232 840 MobiDBLite consensus disorder prediction 608 656 - -
Mal5g5232 840 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 769 - -
Mal5g5232 840 MobiDBLite consensus disorder prediction 688 704 - -
Mal5g5232 840 MobiDBLite consensus disorder prediction 734 759 - -
Mal5g5232 840 ProSiteProfiles TBC/rab GAP domain profile. 33 380 IPR000195 -
Mal5g5232 840 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 37 340 IPR035969 -
Mal5g5232 840 MobiDBLite consensus disorder prediction 604 656 - -
Mal5g5232 840 Pfam Rab-GTPase-TBC domain 280 381 IPR000195 -
Mal5g5232 840 Pfam Rab-GTPase-TBC domain 128 189 IPR000195 -
Mal5g5232 840 MobiDBLite consensus disorder prediction 669 704 - -
Mal5g5232 840 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 114 297 - -
Mal5g5232 840 Gene3D - 319 463 - -
Mal5g5232 840 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 2 769 - -
Mal5g5232 840 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 315 455 IPR035969 -
Mal5g5232 840 SMART tbc_4 53 426 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5232 Mal-Chr5 126286908 126291437 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5232 K18469 - gmx:100816501 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5232 5 126286908 126291437 Mal5g5232 5 126286908 126291437 ECH
Mal5g5232 5 126286908 126291437 Mal4g3415 4 100326549 100331119 PCT