Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5222 ATGCGATCAGGAGGTTGTGCATTGCAGCAGACCCTCACAGCAGAGGCTGCTTCAGTTTTGAAGCATTCTCTTGTGTTGGCTAGAAGGAGAGGCCATCCACAGGTCACTCCTCTACATGTAGCCATCACTTTGCTAACCTTAAGACTCAGTTCTTTCAAAAGAGCTTGTCTTAAATCTCATCAACCTCACCACCAAACTTCACAACATCATCCACTTCAATCTAGAGCTCTTGAGCTTTGTTTCAATGTAGCTCTTAACAGGTTACCAACAACACCTTCTCCTTTGATTCACTCTCAGCCTTCACTTTCTAATGCTCTCATTGCTGCATTGAAAAGAGCACAAGCTCATCAAAGAAGAGGTTCCATAGAACAACAGCAGCAGCAACAGCAAAATGTTCTTACAGTGAAAGTTGAGCTTGAACAGCTTATTATATCCATTCTTGATGATCCTAGTGTTAGTAGGGTTATGAGAGAAGCTGGATTCTCTAGTACTCTTGTTAAGAATAATTTAGAAGACTCTTTTTCACCTTCTAATTCTGTTTTTAAGTGTTATAATAGTTCTGGTGGTGGTGTGTTTTCTTCTCCTTGTTCACCTTCAACAAGTGAGAATCATAGAGAAAACATTAACCTTAGCAGTTTCAGACAGAACCATTTCATGGCTGCTACTAGTGCTAAGCACAGTTCTTCTGAGTTTAACTCAGTTCTCTTTTCTCCACCAAAGAGAAATGAGTTGATGAGTACATCAGGTGGACTTGGCTTGACCCTTCATTCTTCCAGTGTCCTTGATTCAAAGATAAGCATCTCTCAGAACCCATCTCATATGGTTGAAACAAAGCCCTTTAGTAGTAATAAGGAGCATGAGGATAAGCTTAATTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAATTTCTCAGACCTGCAGGACAGAAGAAAACACTGCCTTTCTGGCTTCAGTCTCATAGCACAGAAGAACAAAATAAGGATGGATTAACTGAGTTGAAAAGAAAATGGAATAGACTGTGCCACTGTCTCCACCAAAACAAACAGCATCAAAACCACTGGAACTGGAGCAACAATCACAGTTTAAACCTCAATAATTCATCAAGTTCCATATCTTATAGCTCCAATCTTACACCTCGATTCCGTCGCCAACAATCATGCAGCACCATTGAGTTCAATTTCAATGATAAAAGGGAAGCAACAAAGCCAGTCTTCAATTCCCTTGAAAGCATGGAAGGTAAAGAAGTAAAGATTAGTCTTGCACTTGGAAATGGTAGTTCAAGTGAAAAGGTGGGAACTATAACTGATGCAAAACTGCAACAAGCTCATGTTTGTAAACTATTGCAGGAGAATGTGCCATGGCAATCTGAAACTATTCCTTCAATAGCAAAGGCCTTGATTGATAATACCAAATTATCAAAACAAAGTGAAATTGCATTTACATGGTTATTTTTACAAGGCAATGATTTCATAGGCAAAAGAAGATTAGCACTTGCTATTGCAGAATCAGTTTTTGGTTCATCTGATTTGGTCCTTCAATTGGATATGCTAAAAAAGGAAACTTTAATAGCCCCATTTTCTGAAATGCTGTTAGGAGCATTGAGAAAACATCAACAACTTGTGGTTTTAATTGAAAATGTTGATTCTGCTGATACCCAATTCATGAAATTTCTCTCAAATGGATATGAAAAAGGAAAGTTTGAAACTTTAAGTAGCAAACAAGGGAATTTAGGTCAAGTAATATTCATCTTGACAAAAGGTGGATCCACAAGCATTGAAGAGAAGAACAAAAAAAATGTTATCAATTTGTTGTGGCAAATCAGTGAAATTAAGCCTAATTTCTTGAGCCACAAGAGAAAAGCTGAATTGGATTTGTTTTCCAAAATCAAGAACCCTAGAATTGAAGAGAATGAAAAGGGGTTGTTGATTTCTGAACAAGGAAGCAAAAAGATAGATTTTTTAAGACAATCAAGCTTTAACAGTAACACCCTTGATCTGAACATGAAAGCTGATGAAGAGGAAAATGGTGAAGAAAAAACAAGGGAAAGTAGCTCAATTTCAAGTGATTTAACTAGAGAAACTATGGATAATCCATTGAAATCAAATGGATTTCTTGATTCAATTGAGAACAGGTTTGAGTTTAACACAAGTTTAGATAAAGACAGGGAAAAGACAGAGTTTTTTCTGTTTAAGATTAAAGGGTCATTTGAAGAGGTTTGTGGTAAGAAAAATGTGGTGAATTTTAGTGTAGATGAAAAAGTGATTGAAGATATGTGTTTGGGGTGTTGTTTTTTCACTAACAAAATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTAGAAACAGATAACTTGGGAGGGAAGGAAGGTATACATTTTAGACTTTGTTTGGGTGATAATAGAAATTGGGATAGTGGGTTTATGAGTTCTTCTTTGCCTAAGAGTATCCAAGTTAATTACTTCATAGAATGA 2487 0.3667 MRSGGCALQQTLTAEAASVLKHSLVLARRRGHPQVTPLHVAITLLTLRLSSFKRACLKSHQPHHQTSQHHPLQSRALELCFNVALNRLPTTPSPLIHSQPSLSNALIAALKRAQAHQRRGSIEQQQQQQQNVLTVKVELEQLIISILDDPSVSRVMREAGFSSTLVKNNLEDSFSPSNSVFKCYNSSGGGVFSSPCSPSTSENHRENINLSSFRQNHFMAATSAKHSSSEFNSVLFSPPKRNELMSTSGGLGLTLHSSSVLDSKISISQNPSHMVETKPFSSNKEHEDKLNCCEECASNYEKEAQFLRPAGQKKTLPFWLQSHSTEEQNKDGLTELKRKWNRLCHCLHQNKQHQNHWNWSNNHSLNLNNSSSSISYSSNLTPRFRRQQSCSTIEFNFNDKREATKPVFNSLESMEGKEVKISLALGNGSSSEKVGTITDAKLQQAHVCKLLQENVPWQSETIPSIAKALIDNTKLSKQSEIAFTWLFLQGNDFIGKRRLALAIAESVFGSSDLVLQLDMLKKETLIAPFSEMLLGALRKHQQLVVLIENVDSADTQFMKFLSNGYEKGKFETLSSKQGNLGQVIFILTKGGSTSIEEKNKKNVINLLWQISEIKPNFLSHKRKAELDLFSKIKNPRIEENEKGLLISEQGSKKIDFLRQSSFNSNTLDLNMKADEEENGEEKTRESSSISSDLTRETMDNPLKSNGFLDSIENRFEFNTSLDKDREKTEFFLFKIKGSFEEVCGKKNVVNFSVDEKVIEDMCLGCCFFTNKMFEKWLKDIFQSSLETDNLGGKEGIHFRLCLGDNRNWDSGFMSSSLPKSIQVNYFIE* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5222 828 ProSiteProfiles Clp repeat (R) domain profile. 8 177 IPR004176 -
Mal5g5222 828 MobiDBLite consensus disorder prediction 670 689 - -
Mal5g5222 828 SUPERFAMILY Double Clp-N motif 12 170 IPR036628 -
Mal5g5222 828 PANTHER PROTEIN SMAX1-LIKE 5 248 804 - -
Mal5g5222 828 Coils Coil 283 303 - -
Mal5g5222 828 Gene3D - 417 636 IPR027417 -
Mal5g5222 828 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 205 - -
Mal5g5222 828 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 248 804 - -
Mal5g5222 828 Gene3D - 9 174 IPR036628 -
Mal5g5222 828 PANTHER PROTEIN SMAX1-LIKE 5 1 205 - -
Mal5g5222 828 MobiDBLite consensus disorder prediction 690 705 - -
Mal5g5222 828 MobiDBLite consensus disorder prediction 668 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5222 Mal-Chr5 126184276 126187660 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5222 - - aprc:113853131 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5222 5 126184276 126187660 Mal5g5222 5 126184276 126187660 ECH
Mal5g5222 5 126184276 126187660 Mal4g3378 4 98977193 98981678 PCT