Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5215 ATGTGGAACTCTTTCTGGTGGCGATCCAGAGATCGTTTCTCCTTGGATCAACTCAGTTACTTAACTGATCAATTGACAAAAATTCAAGTTGTCAACGATGCCAATAAGGATTTTGTTATTGAGGCTCTTAGATCAATTGCGGAGTTGATGACATATGGCGATCAACATGACCCGAGCTATTTTGAATTCTTCATGGAAAAACAAGTAATGGGTGAGTTTGTTCGTATTCTAAAACTTAGCAAGACTGTTAGTGTTCCTCTTCAGTTGCTGCAAACAGTTAGCATTTTGGTCCAGAACCTAAGGAATGAACATGCTATATATTATTTGTTTAGTAATGAACATATAAACTACTTGATAACTTATTCATTCGACTTCAAAAATGAAGAGATGTTGTCTTACTACATATCCTTTTTAAGAGCAATAAGTGGAAAATTGAACAAGAATACAGTTTCACTGCTTGTGAAGATTCGCAGTGACGAAGTAGTTTCATTTCCACTATATGTGGAGGCCATACGCTTTGCTTTTCATGAAGAGAACATGGTTCGCATTGCAGTACGAGCTGTGACCCTTAATGTTTATCATGTTGGAGATGACTCTGTAAATAGATACATATCAAGCGCACCTCACAGAGATTATTTCTCAAAGCTGATTTCATTTTTTAGGAAGCAGAGCATGGATTTAAATAAGCTGGTCTCTGATACACTGATAAATCCAGGCCCTGATTCAACCTCTACAATTGTTGGTGCTATAGATGAAATTGAGGACAACCTATACTACTTTAGTGATATTGTCTCTGCTGGAATTCCCGATGTTGGTAGCCTAATTACAGATAGCATTCTGATGGTTTTGATATTTCCATTACTTCTTCCTTCTGTAAGGATAGCAATTGATAATGACATGCAAAGTGGTGTTGTCACTTCTCTCTACTTACTCTGTTGCATCCTGAGGATAATCAAAATTAAAGATTTGGCAAATACCATAGCTGCTGCTCTTTTTTATCCCTTAGAGGCCTTTACAAAAAGTTCTGGGGGTTTTCATCCAGAAGGTGTTCTCCTGCAAAATGATTGTAGCTGTCAAAATTTGTCTTTAAGGGATGTTTTGCTTGCATATGTAACAAAAGGAGATGATGTACAAGTTTTGGGTTCCTTGAGTGTGCTAGCAACTCTACTGCAAACTAAAGAACTTGATGAATCAATGCTAGACGGGCTTGGAATTCTTCCACAACGCAAACAACACAAGAAGCTCTTATTGCAAGCTTTGGTTGGTGAGAGTTCAGGTGAGGAGGAACTTTTTTCTCCCAAAGGTAGCTTGTCAAGGGATGGCTCTGGTAGTGATATTGATGTGTATCAAAAAAAGATAAAGGATCAGTATGGAATATCTTTTCAGTCTTCTGATGTTGGAATTAGCCCTCATGTAAATAGATTTCAGGTGATTGATGCATTGGTGAGCCTTTTTTGCCGCTCTAATATATCTGCGGAGACACTATGGGACGGTGGTTGGCTTTTGCGTCAGTTGCTTCCTTACAGTGAATCAGAATTCAACAGTCACCACCTTGAAGTGTTGAAAGTTTCTTACAAGAACTGTGCTTCTGCTCTTGTAGAGGAGGTTAAAGGCATCTGGCCCGACTTTCTTATTTCTGTTTTATGTGATGAGTGGCGAAAGTGCAAAAGAGCAATGGAATCATCATCTCCACCGAAAGAACCAAGCTGCATGATTTTGTTGCCACATTCACATAAATTCTCTTTAGAAGATAACATTCCAAAGGGATCATCATTTGCTGCGGGTGAAAGAATGCAAGAACTGCTGAAGGTATTTGTACTTCTTCACCAACTTCAATTATTCACTCTTGGAAGAGCTTTACCTGAGCAACCTCCAATTTGCCCTCCTGGTGATCTTCCCACAAATTGTCGTGCACAGATTTTTGGGCTTGATGTATCCGGCCCAAAGGCAGGCACTGAAATCAGCCTTGTTAATGCTGTGCCTTGTAGAATTGCTTTCAAGAGTGGCAAAGAACACCATCTTTGCTTTCAAGCAATCTCTTTAGGAATATCTGGCTGGCTTGTTCTTGCAGAAGAATTGCCATCACAGAAGTCCCATGGAATCGTTCGGGTGGTTGCACCTCTGGCTGGGTGCAATCCCAGGATTGATGATACACATTCAACATGGTTACACTTGCGGATCCGGTCATCCTCTTTACCCTTTCTAGCTCCTGCCAAATCAAATGACTATGGGAGAATGAAAACAAAAGGTTTGGTAGATGGAAGATGGACATTGGCATTCAGGGATGAGGAGTCTTGCAACTCAGCTTTGGCTATGATTGTTGAAGAGGTCAATTTTCTGAGTGACGAGGTTCATAGAAGACTCAAACCTTTGCTCAGCCTTGAAACTGCAATAGATTTATCAAGCTCACATTTATGTGTTCCAGAGGATTCCTCTAATAGAATGCTTCCCAAGTCATTGTAA 2463 0.3995 MWNSFWWRSRDRFSLDQLSYLTDQLTKIQVVNDANKDFVIEALRSIAELMTYGDQHDPSYFEFFMEKQVMGEFVRILKLSKTVSVPLQLLQTVSILVQNLRNEHAIYYLFSNEHINYLITYSFDFKNEEMLSYYISFLRAISGKLNKNTVSLLVKIRSDEVVSFPLYVEAIRFAFHEENMVRIAVRAVTLNVYHVGDDSVNRYISSAPHRDYFSKLISFFRKQSMDLNKLVSDTLINPGPDSTSTIVGAIDEIEDNLYYFSDIVSAGIPDVGSLITDSILMVLIFPLLLPSVRIAIDNDMQSGVVTSLYLLCCILRIIKIKDLANTIAAALFYPLEAFTKSSGGFHPEGVLLQNDCSCQNLSLRDVLLAYVTKGDDVQVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGESSGEEELFSPKGSLSRDGSGSDIDVYQKKIKDQYGISFQSSDVGISPHVNRFQVIDALVSLFCRSNISAETLWDGGWLLRQLLPYSESEFNSHHLEVLKVSYKNCASALVEEVKGIWPDFLISVLCDEWRKCKRAMESSSPPKEPSCMILLPHSHKFSLEDNIPKGSSFAAGERMQELLKVFVLLHQLQLFTLGRALPEQPPICPPGDLPTNCRAQIFGLDVSGPKAGTEISLVNAVPCRIAFKSGKEHHLCFQAISLGISGWLVLAEELPSQKSHGIVRVVAPLAGCNPRIDDTHSTWLHLRIRSSSLPFLAPAKSNDYGRMKTKGLVDGRWTLAFRDEESCNSALAMIVEEVNFLSDEVHRRLKPLLSLETAIDLSSSHLCVPEDSSNRMLPKSL* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5215 820 Pfam Uncharacterised conserved protein 43 193 IPR019155 -
Mal5g5215 820 PANTHER PROTEIN TRANSPARENT TESTA 9 1 343 - -
Mal5g5215 820 PANTHER UNCHARACTERIZED 341 803 IPR039272 -
Mal5g5215 820 SUPERFAMILY ARM repeat 31 507 IPR016024 -
Mal5g5215 820 PANTHER UNCHARACTERIZED 1 343 IPR039272 -
Mal5g5215 820 PANTHER PROTEIN TRANSPARENT TESTA 9 341 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5215 Mal-Chr5 126070734 126081529 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5215 K19513 - gmx:100786267 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5215 5 126070734 126081529 Mal5g5215 5 126070734 126081529 ECH
Mal5g5215 5 126070734 126081529 Mal4g3377 4 98949736 98962871 PCT