Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5054 ATGGCTTATTCAATAGGCTATGTTGATCCTTGTTCTCATTTGAGCAAGGTTTATTCTGCTAATGTTTTTGGGGTTAGTAGAGGAATTGGATTTGGTAGAAAAGGTTGTGGCTTTTATACTAGTGGTAGTTTTAATAGTAGTAGATTTTTTGTGAGGGCTAATGCGAGGCCTCGCGGTTTTGCATCTGATTTGGAACAAGGGAATTCTGTTGGTGGTATTGATGCTACTGTTATTAAGGTTGATAATGGTGGGGTGAATGGAAATCCTGCTACACCGCGTTGTTTTCGGGATCAACGTTTGTCTGAGAAACTTGTTGTTGCTGTTGATGTGGATGAGGTATTAGGAAACTTCGTGTCGGCTCTCAACAAGTATATTGCAGATCAATATTCATCAAATTATTCAGTTTCTGAATATCAAGTGTACGAGTTCTTTAAGATATGGAACTGTTCGCGCGATGAAGCTGATATTCGTGTTCATGAGTTTTTTAAGACACCATATTTCAAGTCAGGGATTCACCCTCTCCCAGGTGCTCAGACGGCAATTCAAAAGTTATCAAGATTTTTTAACCTATCCATTGTAACGTCTCGGCAAAATGTAATTAAGGATCACACTATTGAATGGATAGAGAAAAATTTCCCAGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCACTTGATGGGATATCAAGACCAAAATCAGAGATTTGTAGGTCTTTAAATGCCAAGGTTCTTATTGATGATAATCCGCGGTATGCAATAGAGTGCGCTGAAGTTGGAATTAAAGTCCTACTTTTTGATTATGAAAACTCATATCCTTGGTCCAAGAATGAGTTAGTTGACGAGCACCCTTTGGTGACCAAAGTTAAGAACTGGACAGAAGTGGAACAACAATTGATGTCATTGATAGCTTCACAGTCTAAATCATGA 933 0.3848 MAYSIGYVDPCSHLSKVYSANVFGVSRGIGFGRKGCGFYTSGSFNSSRFFVRANARPRGFASDLEQGNSVGGIDATVIKVDNGGVNGNPATPRCFRDQRLSEKLVVAVDVDEVLGNFVSALNKYIADQYSSNYSVSEYQVYEFFKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAQTAIQKLSRFFNLSIVTSRQNVIKDHTIEWIEKNFPGLFHEIHFGNHFALDGISRPKSEICRSLNAKVLIDDNPRYAIECAEVGIKVLLFDYENSYPWSKNELVDEHPLVTKVKNWTEVEQQLMSLIASQSKS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5054 310 PANTHER NUCLEOTIDASE YQFW-RELATED 23 305 - -
Mal5g5054 310 SUPERFAMILY HAD-like 96 301 IPR036412 -
Mal5g5054 310 Gene3D - 139 303 IPR023214 -
Mal5g5054 310 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 104 300 IPR010708 GO:0008253|GO:0009264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5054 Mal-Chr5 124202337 124205599 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5054 - - gmx:100793947 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5054 5 124202337 124205599 Mal5g5054 5 124202337 124205599 ECH
Mal5g5054 5 124202337 124205599 Mal4g2825 4 81218807 81222672 PCT